Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G443100.1 |
Family | CBM43 |
Protein Properties | Length: 114 Molecular Weight: 12042.3 Isoelectric Point: 4.6984 |
Chromosome | Chromosome/Scaffold: 09 Start: 69435338 End: 69436593 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 25 | 108 | 4.7e-35 |
WCVANGKADEKKLQAALDYACGEGEADCSPIQPGATCYNPNTLEAHASYTFNSYYQKNTHATGTCEFGGAAYVVTQRLTYGNCE |
Full Sequence |
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Protein Sequence Length: 114 Download |
MPVNTNTSQV SVVGEVSKVK VGQTWCVANG KADEKKLQAA LDYACGEGEA DCSPIQPGAT 60 CYNPNTLEAH ASYTFNSYYQ KNTHATGTCE FGGAAYVVTQ RLTYGNCEFP TGD* 120 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 9.0e-23 | 24 | 96 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-36 | 24 | 109 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL77689.1 | 1.4013e-45 | 2 | 112 | 352 | 459 | AT5g55180/MCO15_13 [Arabidopsis thaliana] |
GenBank | AAM66024.1 | 1.4013e-45 | 2 | 112 | 352 | 459 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
RefSeq | NP_568822.1 | 1.4013e-45 | 2 | 112 | 352 | 459 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002278044.1 | 0 | 2 | 112 | 356 | 470 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002529472.1 | 0 | 2 | 112 | 357 | 471 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 4e-20 | 20 | 112 | 8 | 99 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BQ413459 | 113 | 2 | 114 | 0 |
DT457724 | 112 | 3 | 114 | 0 |
DT457723 | 112 | 3 | 114 | 0 |
CO113125 | 111 | 2 | 112 | 0 |
DW226136 | 113 | 2 | 114 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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