| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.010G052200.1 |
| Family | GH35 |
| Protein Properties | Length: 819 Molecular Weight: 91818.6 Isoelectric Point: 8.5833 |
| Chromosome | Chromosome/Scaffold: 10 Start: 6009651 End: 6014775 |
| Description | beta-galactosidase 16 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 33 | 337 | 0 |
| LIIDGQHKILFSGSIHYPRSTPQMWPSLIAKAKAGGLDVIETLVFWNLHEPQPEQFDFSGQRDIVRFIKEIQAQGLYACIRIGPFIQGEWSYGGLPFWLH DIPGIVYRSDNEPFKYQMKKFVSKIVNMMKAEKLYASQGGPIILSQIENEYGMVEAAFRDKGPPYLRWAAEMAVGLQTGVPWVMCKQNNAPDPVINACNG RRCGETFPGPNSPNKPAIWTENWTSFYQVYGDEPDIRSAEDIAFHVALFIAKKGSYVNYYMYHGGTNFGRTAAAYVLTSYYDQAPLDEYGLFRQPKWGHL KELHA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 819 Download |
| MGSWLFLFLV GLFLAASVSG VGSRNVTYDG RSLIIDGQHK ILFSGSIHYP RSTPQMWPSL 60 IAKAKAGGLD VIETLVFWNL HEPQPEQFDF SGQRDIVRFI KEIQAQGLYA CIRIGPFIQG 120 EWSYGGLPFW LHDIPGIVYR SDNEPFKYQM KKFVSKIVNM MKAEKLYASQ GGPIILSQIE 180 NEYGMVEAAF RDKGPPYLRW AAEMAVGLQT GVPWVMCKQN NAPDPVINAC NGRRCGETFP 240 GPNSPNKPAI WTENWTSFYQ VYGDEPDIRS AEDIAFHVAL FIAKKGSYVN YYMYHGGTNF 300 GRTAAAYVLT SYYDQAPLDE YGLFRQPKWG HLKELHAAIK LCLNPMLSGV YTTMALGKSQ 360 EAFVYRGNSV DCAAFLVNND TRKTVVVTFQ DSLYEMPPKS ISILPDCKTV AFNTAKVSTQ 420 YNTRAVETSK KLDSIVKWEE YKETIPTFED TSLRANMLLE HMNTTKDNSD YLWYNFRFQN 480 DFSDAEYVLN VTSSAHVLHA FVNGSFVGST HGSFKTKTPI LESKITLNKG TNYISLLSGM 540 AGLPDSGAYL ERRVAGINTV RVKGEHEIKD FTRYSWGYQV GLLGEKLQVY TDSGSNKVKW 600 NTYGSSTHQR LTWYRTLFDA PAGKDPVTLN LESMGKGEAW INGQSIGRYW VSFLTPKGIP 660 SQTRYNVPRS FLKRTDNLLV ILEEENGYPL GISIDTISIT KVCGHVSESH LPPVISWQGQ 720 NKTEHNNSKK HHGRRPKVQL QCPPGRNISR ILFASYGNPT GDCENYAIGS CHSFTSLPTI 780 EEACMGKRIC TIPVWRKKFG NDPCPGIPKT LLVDAQCT* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13364 | BetaGal_dom4_5 | 5.0e-5 | 461 | 509 | 49 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
| pfam02140 | Gal_Lectin | 4.0e-20 | 740 | 817 | 81 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 2.0e-20 | 26 | 301 | 317 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-148 | 32 | 339 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 22 | 818 | 831 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI18990.1 | 0 | 1 | 818 | 5 | 817 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI18991.1 | 0 | 27 | 817 | 33 | 820 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002284529.1 | 0 | 27 | 817 | 25 | 812 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002302225.1 | 0 | 22 | 818 | 4 | 798 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002306647.1 | 0 | 25 | 818 | 1 | 764 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 1e-39 | 32 | 322 | 14 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.00006 | 476 | 683 | 387 | 572 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 8e-31 | 26 | 322 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 8e-31 | 26 | 322 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
