| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.010G052300.1 |
| Family | GH35 |
| Protein Properties | Length: 592 Molecular Weight: 66491.5 Isoelectric Point: 8.7806 |
| Chromosome | Chromosome/Scaffold: 10 Start: 6020736 End: 6028645 |
| Description | beta-galactosidase 16 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 50 | 354 | 0 |
| LMIDGQHLLLFSGSIHYPRSTPQMWPSLISKAKLGGIDVIQTYVFWNLHEPQQGQYDFSGSRDIVRFIREVQAHGLYVCLRIGPFIESEWTYGGLPFWLH DVPGIVFRSDNGPFKFHMQKWVRKVVNMMKSEKLYASQGGPIILSQIENEYQRIESAFNGKGSRYVQWAAGLAVGLQTGVPWIMCSQQDAPDPVINTCNG FECGVNFEGPNSPNKPSLWTENWTSFVQRYGEEPFIRSAADIAFHVALFVAKNGTYVNYYMYHGGTNFGRTAAANVITSYYDQAPLDEYGLIRQPLWGHL KELHA | |||
| Full Sequence |
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| Protein Sequence Length: 592 Download |
| MRAGITSSIG CPFAVCLTHI HLVRPGRVTD RQPKSYPSSN KPVTFDGRSL MIDGQHLLLF 60 SGSIHYPRST PQMWPSLISK AKLGGIDVIQ TYVFWNLHEP QQGQYDFSGS RDIVRFIREV 120 QAHGLYVCLR IGPFIESEWT YGGLPFWLHD VPGIVFRSDN GPFKFHMQKW VRKVVNMMKS 180 EKLYASQGGP IILSQIENEY QRIESAFNGK GSRYVQWAAG LAVGLQTGVP WIMCSQQDAP 240 DPVINTCNGF ECGVNFEGPN SPNKPSLWTE NWTSFVQRYG EEPFIRSAAD IAFHVALFVA 300 KNGTYVNYYM YHGGTNFGRT AAANVITSYY DQAPLDEYGL IRQPLWGHLK ELHAAIKLCK 360 VPLLAGSYET SSLGHLQIAY VFKGKSGKCA AFLVNNDNTS NARVRFQNIS FELPSMSISI 420 LPDCKNVAFN TAKVSTQYNT RSRTVKYKFD SMERWEEFNE PIPIFSNTLL KANALLDHMS 480 TTKDTSDYLW YTVSFQHESD AEAELSVVSN AHVVHAFVNG AYKGYAHGGK HNSALENPIE 540 LKNGTNHITL LSVMVGFPNS GAYLERKTAG IRSVRIQNRY LNNYQWGYQV I* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 7.0e-6 | 65 | 200 | 154 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam13364 | BetaGal_dom4_5 | 3.0e-6 | 478 | 555 | 80 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
| COG1874 | LacA | 5.0e-21 | 43 | 200 | 166 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 4.0e-153 | 49 | 356 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 43 | 590 | 565 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG51670.1 | 0 | 43 | 590 | 25 | 577 | AC010704_14 putative beta-galactosidase, 3' partial; 3669-1 [Arabidopsis thaliana] |
| DDBJ | BAC43014.1 | 0 | 43 | 590 | 25 | 577 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_177866.2 | 0 | 43 | 590 | 25 | 577 | BGAL16 (beta-galactosidase 16); beta-galactosidase/ catalytic/ cation binding / sugar binding [Arabidopsis thaliana] |
| RefSeq | XP_002302225.1 | 0 | 43 | 590 | 8 | 562 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002306647.1 | 0 | 43 | 590 | 2 | 552 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 7e-40 | 49 | 341 | 14 | 315 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 7e-34 | 43 | 343 | 11 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 7e-34 | 43 | 343 | 11 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 7e-34 | 43 | 343 | 11 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_A | 7e-34 | 43 | 343 | 11 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| HO778160 | 564 | 43 | 590 | 0 |
| DY961675 | 285 | 43 | 326 | 0 |
| CO074493 | 292 | 142 | 433 | 0 |
| HO780602 | 515 | 93 | 590 | 0 |
| DY813320 | 259 | 43 | 301 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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