| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.010G053100.2 |
| Family | GH33 |
| Protein Properties | Length: 322 Molecular Weight: 36024 Isoelectric Point: 6.7826 |
| Chromosome | Chromosome/Scaffold: 10 Start: 6092906 End: 6096441 |
| Description | BNR/Asp-box repeat family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH33 | 16 | 311 | 2.5e-28 |
| TFSTTSAPFKSCHASTIVEVDKDHFLAAYFGGSYEGAPDVKIWLQKYKDGCWYPPLVIDEQPNVPMWNPVLFKLPSEELLLFYKAGQEVQKWSGCMKRSY DKGVTWTKREQLPPGILGPSKNKPILLENGVLLCGSSVESWNSWGSWVEVTTDSGISWKKYGPIYVKNRSLSVIQPVPYVTSKGTLRVLMRSFEGIGRVC MSESHDGGHNWDYAKPTQLPNPNSGIDGVKLSDGRILLAYNTISRGVLKVAVSTDDGDSWNEVLTLEENLEMEFSYPAVIEASDGLVHITYTYNRT | |||
| Full Sequence |
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| Protein Sequence Length: 322 Download |
| MKKAYSIQGP VREEFTFSTT SAPFKSCHAS TIVEVDKDHF LAAYFGGSYE GAPDVKIWLQ 60 KYKDGCWYPP LVIDEQPNVP MWNPVLFKLP SEELLLFYKA GQEVQKWSGC MKRSYDKGVT 120 WTKREQLPPG ILGPSKNKPI LLENGVLLCG SSVESWNSWG SWVEVTTDSG ISWKKYGPIY 180 VKNRSLSVIQ PVPYVTSKGT LRVLMRSFEG IGRVCMSESH DGGHNWDYAK PTQLPNPNSG 240 IDGVKLSDGR ILLAYNTISR GVLKVAVSTD DGDSWNEVLT LEENLEMEFS YPAVIEASDG 300 LVHITYTYNR TQIKHVILQP N* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4692 | COG4692 | 9.0e-28 | 23 | 320 | 350 | + Predicted neuraminidase (sialidase) [Carbohydrate transport and metabolism] | ||
| pfam13088 | BNR_2 | 2.0e-94 | 38 | 304 | 282 | + BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU18568.1 | 0 | 1 | 321 | 34 | 354 | unknown [Glycine max] |
| RefSeq | NP_851204.1 | 0 | 13 | 319 | 16 | 322 | BNR/Asp-box repeat family protein [Arabidopsis thaliana] |
| RefSeq | XP_002263578.1 | 0 | 7 | 321 | 55 | 369 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324495.1 | 0 | 11 | 321 | 11 | 321 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002531744.1 | 0 | 1 | 321 | 1 | 321 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DV137355 | 268 | 40 | 307 | 0 |
| EL689016 | 288 | 18 | 305 | 0 |
| DV145816 | 255 | 37 | 291 | 0 |
| EY114510 | 258 | 10 | 267 | 0 |
| CO122542 | 208 | 1 | 208 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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