Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.010G060600.1 |
Family | GT47 |
Protein Properties | Length: 483 Molecular Weight: 54610 Isoelectric Point: 9.5301 |
Chromosome | Chromosome/Scaffold: 10 Start: 7257260 End: 7260604 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 148 | 431 | 0 |
EKRFKVWVYREGEPPLVHGGPVSNIYGIEGQFIDEMESGKSRFLARHPEEAHAFFIPISVANIVKVLYRPLVTYSRDQLHRVVADYVGVVAQKYPYWNRS NGADHFLISCHDWAPDIGDSNPALFNNFIRVLCNANTSEKFNPRRDVSMPEINIPKAQLGPPHLDLPPVNSSILAFFAGGAHGYIRKLLLEHWKDKDEEV QVHEYLSKEKDYFKLMGETKFCLCPSGYEVASPRVATAISVGCVPVIISDNYALPFSDVLDWSEFSVHIPSERIPEIKRILKGI |
Full Sequence |
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Protein Sequence Length: 483 Download |
MAEVGCHNIN CLLLSASLAF CLLVWYLSSP LKYQSKLTIL FSTFPPNSHI KTSQETAPSS 60 PPSPPPSAAS PAPLTSLNAT TGGDAITRPN KRKSSLEKVE EGLAKARAAI REAILVRNYT 120 SYKKETFVPR GIIYRNPYAF HQSHIEMEKR FKVWVYREGE PPLVHGGPVS NIYGIEGQFI 180 DEMESGKSRF LARHPEEAHA FFIPISVANI VKVLYRPLVT YSRDQLHRVV ADYVGVVAQK 240 YPYWNRSNGA DHFLISCHDW APDIGDSNPA LFNNFIRVLC NANTSEKFNP RRDVSMPEIN 300 IPKAQLGPPH LDLPPVNSSI LAFFAGGAHG YIRKLLLEHW KDKDEEVQVH EYLSKEKDYF 360 KLMGETKFCL CPSGYEVASP RVATAISVGC VPVIISDNYA LPFSDVLDWS EFSVHIPSER 420 IPEIKRILKG ISEKKYLKLQ KRVRQVRRHF VLNRPAKPFD VIYMLLHSVW LRRLNFRVPT 480 PS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 5.0e-65 | 147 | 431 | 303 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI25529.1 | 0 | 94 | 478 | 2 | 386 | unnamed protein product [Vitis vinifera] |
EMBL | CBI25537.1 | 0 | 34 | 479 | 30 | 476 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_197526.4 | 0 | 79 | 479 | 6 | 408 | catalytic [Arabidopsis thaliana] |
Swiss-Prot | Q3E9A4 | 0 | 47 | 479 | 36 | 466 | GLYT5_ARATH RecName: Full=Probable glycosyltransferase At5g20260 |
RefSeq | XP_002531945.1 | 0 | 8 | 479 | 9 | 451 | catalytic, putative [Ricinus communis] |