| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.010G082900.1 |
| Family | GH35 |
| Protein Properties | Length: 844 Molecular Weight: 93961.9 Isoelectric Point: 7.9686 |
| Chromosome | Chromosome/Scaffold: 10 Start: 12266666 End: 12272108 |
| Description | beta galactosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 41 | 343 | 0 |
| IINGRRRILLSGSIHYPRSTPQMWPDLIAKAKEGGLDVIQTYVFWNGHEPSPGNYYFEDRYDLVRFIKLVQQAGLYVHLRIGPYICAEWNFGGFPVWLKY VPGIAFRTDNEPFKAAMQKFTEKIVSMMKAEKLFETQGGPIIMSQIENEFGPVEWEIGDPGKAYIKWAAQMAVGLDTGVPWIMCKQDDAPDPVINTCNGF YCENFTPNAKYKPKMWTENWTGWYTEFGGAVPTRPAEDIAFSVARFIQNGGSFVNYYMYHGGTNFGRTASGLFIATSYDYDAPIDEYGLPREPKWGHLRD LHR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 844 Download |
| MWWDKNMLSK VVNMFMLWLL FSSWVFSLVS ATVSYDSKAI IINGRRRILL SGSIHYPRST 60 PQMWPDLIAK AKEGGLDVIQ TYVFWNGHEP SPGNYYFEDR YDLVRFIKLV QQAGLYVHLR 120 IGPYICAEWN FGGFPVWLKY VPGIAFRTDN EPFKAAMQKF TEKIVSMMKA EKLFETQGGP 180 IIMSQIENEF GPVEWEIGDP GKAYIKWAAQ MAVGLDTGVP WIMCKQDDAP DPVINTCNGF 240 YCENFTPNAK YKPKMWTENW TGWYTEFGGA VPTRPAEDIA FSVARFIQNG GSFVNYYMYH 300 GGTNFGRTAS GLFIATSYDY DAPIDEYGLP REPKWGHLRD LHRAIKLSEP ALVSADPTVT 360 SLGSNQEAHV FKSKSGACAA FLANYDTKYS VKVTFGSAHY ELPRWSITIL PDCKTAVFNT 420 ARLGAQSSEK KMVLANTAFS WQSYNEESPS ADDQDVTVHD GLWEQIYITR DATDYLWYMT 480 DVQIDSDEGF LRSGQDPLLT IWSAGHALHV FINGQLSGTV YGGLENPKLT FSNNVKLRAG 540 INKVTLLSVA VGLSNVGTHF ETWNVGVLGP VTLKGLNEGT RDLSKQKWSY KQIGLKGEAL 600 KLHTVAGSSS VEWVEGSQLV KKQPMTWYKT TFDAPGGNEP LGLDMSSMGK GQLWINGQSI 660 GRHWPGYIAH GNCYACDYAG TYSDQKCRTN CGEPSQRWYH VPRSWLKPSG NFLVVYEEWG 720 GDPNGIALAK RTTASVCADI FEGQPTMKKR GMLIAGRISR PKAHLWCPPG QKISKINFAS 780 YGMPEGSCGN FREGSCHAHK SYDAFQKNCI GKQSCSVTVA PEVFGGDPCP GSRKKLSVEA 840 ACK* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam02449 | Glyco_hydro_42 | 4.0e-5 | 55 | 191 | 151 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. |
| COG1874 | LacA | 8.0e-22 | 33 | 335 | 354 | + Beta-galactosidase [Carbohydrate transport and metabolism] |
| pfam02140 | Gal_Lectin | 3.0e-24 | 765 | 842 | 81 | + Galactose binding lectin domain. |
| pfam01301 | Glyco_hydro_35 | 1.0e-166 | 39 | 345 | 322 | + Glycosyl hydrolases family 35. |
| PLN03059 | PLN03059 | 0 | 31 | 842 | 814 | + beta-galactosidase; Provisional |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABV32546.1 | 0 | 29 | 842 | 24 | 835 | beta-galactosidase protein 1 [Prunus persica] |
| GenBank | ABY71826.1 | 0 | 23 | 842 | 18 | 835 | beta-galactosidase [Prunus salicina] |
| EMBL | CBI27912.1 | 0 | 15 | 842 | 6 | 832 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002308268.1 | 0 | 26 | 842 | 21 | 837 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514108.1 | 0 | 24 | 842 | 22 | 839 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 6.02558e-44 | 26 | 341 | 1 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 2e-39 | 33 | 341 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 2e-39 | 33 | 341 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
