| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.010G083400.1 |
| Family | AA7 |
| Protein Properties | Length: 523 Molecular Weight: 58682.1 Isoelectric Point: 8.8455 |
| Chromosome | Chromosome/Scaffold: 10 Start: 12359155 End: 12361918 |
| Description | cytokinin oxidase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA7 | 61 | 256 | 2.3e-25 |
| VKAVPQAVFLPSSPWDIASLVNFSYRNSVPFIIAARGNSHSVNGQAMAKNGVVIDMTSMKNGNGTGIRIASDGSYADVGGQQFWIDVLNATLGLGLTPVS WTDYLYLTVGGTLSNAGISGQTFRYGPQISNVYEIDVITGTADFVTCSPNNNSDLFYAALGGLGQFGIITRARIPLEPAPKRVKWVRMLYTDFSDF | |||
| Full Sequence |
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| Protein Sequence Length: 523 Download |
| MAVALPSFLT AIMIMSRLMA FIGITRNNDM SSKLQALDIA PKLSYDPSAI ESASQDFGHI 60 VKAVPQAVFL PSSPWDIASL VNFSYRNSVP FIIAARGNSH SVNGQAMAKN GVVIDMTSMK 120 NGNGTGIRIA SDGSYADVGG QQFWIDVLNA TLGLGLTPVS WTDYLYLTVG GTLSNAGISG 180 QTFRYGPQIS NVYEIDVITG TADFVTCSPN NNSDLFYAAL GGLGQFGIIT RARIPLEPAP 240 KRVKWVRMLY TDFSDFTRDQ ELLISKNGRN DNKALNYLEG SLLLDQGSLD NWRSSFFQPQ 300 DQPKIISLIT KFRIVYCLEI VKHYDGQTKT TVDKDLQQLL KGLSYLPGFM FEKDAKYEEF 360 LNRVHSEELK LKAKGLWDVP HPWLNLFIPK SKISDFNDGV FKSIVLQRNI TTGPVLVYPM 420 NRKKWDDRMS AVIPDEEIFY TVGLLQSSGF DDWRTFEAQN KEILQFCEKA GIKVKQYLPH 480 YTTKEGWVNH FGSKWSTFQK RKLQFDPKLL LSPGQRIFNN NE* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02805 | PLN02805 | 2.0e-6 | 43 | 241 | 210 | + D-lactate dehydrogenase [cytochrome] | ||
| pfam01565 | FAD_binding_4 | 5.0e-23 | 65 | 208 | 145 | + FAD binding domain. This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidises the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan. | ||
| COG0277 | GlcD | 9.0e-29 | 42 | 515 | 485 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
| pfam09265 | Cytokin-bind | 2.0e-147 | 240 | 518 | 284 | + Cytokinin dehydrogenase 1, FAD and cytokinin binding. Members of this family adopt an alpha+beta sandwich structure with an antiparallel beta-sheet, in a ferredoxin-like fold. They are predominantly found in plant cytokinin dehydrogenase 1, where they are capable of binding both FAD and cytokinin substrates. The substrate displays a 'plug-into-socket' binding mode that seals the catalytic site and precisely positions the carbon atom undergoing oxidation in close contact with the reactive locus of the flavin. | ||
| PLN02441 | PLN02441 | 0 | 1 | 521 | 526 | + cytokinin dehydrogenase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
| GO:0009690 | cytokinin metabolic process |
| GO:0016491 | oxidoreductase activity |
| GO:0019139 | cytokinin dehydrogenase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACM79256.1 | 0 | 1 | 521 | 3 | 526 | cytokinin oxidase/dehydrogenase [Gossypium hirsutum] |
| RefSeq | XP_002264445.1 | 0 | 1 | 520 | 1 | 521 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002279519.1 | 0 | 4 | 520 | 6 | 520 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002308300.1 | 0 | 9 | 520 | 11 | 528 | cytokinin oxidase [Populus trichocarpa] |
| RefSeq | XP_002514119.1 | 0 | 4 | 519 | 6 | 529 | gulonolactone oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1w1s_A | 0 | 1 | 519 | 1 | 534 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1w1r_A | 0 | 1 | 519 | 1 | 534 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1w1q_A | 0 | 1 | 519 | 1 | 534 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1w1o_A | 0 | 1 | 519 | 1 | 534 | A Chain A, Native Cytokinin Dehydrogenase |
| PDB | 3s1c_A | 0 | 22 | 519 | 8 | 516 | A Chain A, Native Cytokinin Dehydrogenase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CO121610 | 274 | 168 | 441 | 0 |
| CO117912 | 280 | 1 | 277 | 0 |
| HO781924 | 484 | 44 | 518 | 0 |
| DV135604 | 257 | 263 | 519 | 0 |
| DY269838 | 330 | 65 | 385 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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