Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.010G094800.2 |
Family | CE8 |
Protein Properties | Length: 395 Molecular Weight: 43337 Isoelectric Point: 8.4337 |
Chromosome | Chromosome/Scaffold: 10 Start: 15721479 End: 15724534 |
Description | pectin methylesterase 44 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 82 | 376 | 0 |
AVVALDGTGTFTNIMDAVAAAPDYSMNRHVIYIKKGLYKENVEIKKKKWNLMMVGDGINGTIISGNRSFVDGWTTFRSATFAVSGRGFIARDITFENTAG PQKHQAVALRSDSDLSVFFRCAIKGYQDSLYTHTMRQFFRECRITGTVDFIFGDASVVFQNCQILAKQGLPNQKNTITAQGRKDPNQPTGFSIQFCNISA DADLLPFVNSTPTYLGRPWKLYSRTIIMQSYIGNAVRPQGWLEWNQDFALDTLYYAEFMNFGPGAGLGGRVQWPGYHALNNSAQAGNFTVARLIE |
Full Sequence |
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Protein Sequence Length: 395 Download |
MANQETCIEG FEGTNGIAKT VVAGGLNQVT SLVSDLLTMV QPPGSDSRSN GDRKVAEKNR 60 FPSWFEREDQ KLLQANGVTA DAVVALDGTG TFTNIMDAVA AAPDYSMNRH VIYIKKGLYK 120 ENVEIKKKKW NLMMVGDGIN GTIISGNRSF VDGWTTFRSA TFAVSGRGFI ARDITFENTA 180 GPQKHQAVAL RSDSDLSVFF RCAIKGYQDS LYTHTMRQFF RECRITGTVD FIFGDASVVF 240 QNCQILAKQG LPNQKNTITA QGRKDPNQPT GFSIQFCNIS ADADLLPFVN STPTYLGRPW 300 KLYSRTIIMQ SYIGNAVRPQ GWLEWNQDFA LDTLYYAEFM NFGPGAGLGG RVQWPGYHAL 360 NNSAQAGNFT VARLIEGDLW LPSTGVKYTA GLGA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 1.0e-169 | 1 | 392 | 403 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 4.0e-175 | 1 | 392 | 394 | + pectinesterase/pectinesterase inhibitor | ||
PLN02506 | PLN02506 | 3.0e-178 | 1 | 393 | 399 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 0 | 1 | 392 | 398 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 81 | 378 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92470.1 | 0 | 1 | 392 | 132 | 526 | unknown [Populus trichocarpa] |
DDBJ | BAF42041.1 | 0 | 1 | 394 | 124 | 509 | pectin methylesterase 4 [Pyrus communis] |
EMBL | CBI29628.1 | 0 | 3 | 393 | 133 | 526 | unnamed protein product [Vitis vinifera] |
Swiss-Prot | Q43062 | 0 | 1 | 393 | 136 | 521 | PME_PRUPE RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase inhibitor PPE8B; AltName: Full=Pectin methylesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase PPE8B; Short=PE PPE8B; AltName: Full=Pectin methylesterase PPE8B; Flags: Precursor |
RefSeq | XP_002326321.1 | 0 | 1 | 392 | 124 | 518 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 78 | 392 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 74 | 392 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 3e-22 | 78 | 383 | 2 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 3e-22 | 78 | 383 | 2 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 3e-22 | 78 | 300 | 2 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY290214 | 360 | 11 | 360 | 0 |
CU542007 | 246 | 104 | 349 | 0 |
GO242458 | 311 | 60 | 370 | 0 |
CU493662 | 241 | 119 | 359 | 0 |
CV233766 | 270 | 123 | 392 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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