Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.010G135300.1 |
Family | GT5 |
Protein Properties | Length: 266 Molecular Weight: 29791 Isoelectric Point: 8.7661 |
Chromosome | Chromosome/Scaffold: 10 Start: 30700547 End: 30704047 |
Description | starch synthase 4 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT5 | 16 | 259 | 0 |
PKGLNSARIYFTCHNFEYQGTASASELASCGLDAQELNRPDRMQDNTAHDSVNPVKGAIVFSNIVMTVSPTYAQEVRTAEGGKGLHSTLNSHTRKFMGIL NGINTDAWNPRTDNFLKVQYSANDKQGKAENKAAMRRNLGLSSADDQRPVVGCITRLVPQKGVHLIKHAIYRTLEMGSQFVLLGSCPVPHIQREFEGIAN QFQNHEHIRLILKYDESLSHAIYAASDMFIFPSIFEPCGLTQCL |
Full Sequence |
---|
Protein Sequence Length: 266 Download |
MIVHWIKKAP LYWYAPKGLN SARIYFTCHN FEYQGTASAS ELASCGLDAQ ELNRPDRMQD 60 NTAHDSVNPV KGAIVFSNIV MTVSPTYAQE VRTAEGGKGL HSTLNSHTRK FMGILNGINT 120 DAWNPRTDNF LKVQYSANDK QGKAENKAAM RRNLGLSSAD DQRPVVGCIT RLVPQKGVHL 180 IKHAIYRTLE MGSQFVLLGS CPVPHIQREF EGIANQFQNH EHIRLILKYD ESLSHAIYAA 240 SDMFIFPSIF EPCGLTQCLY KRFTL* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02316 | PLN02316 | 5.0e-67 | 4 | 263 | 268 | + synthase/transferase | ||
PRK00654 | glgA | 3.0e-92 | 12 | 260 | 249 | + glycogen synthase; Provisional | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 5.0e-95 | 9 | 257 | 252 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
TIGR02095 | glgA | 8.0e-98 | 9 | 257 | 249 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
PLN02939 | PLN02939 | 2.0e-174 | 9 | 263 | 257 | + transferase, transferring glycosyl groups |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB40375.1 | 0 | 9 | 263 | 520 | 776 | starch synthase, isoform V [Vigna unguiculata] |
RefSeq | NP_193558.3 | 0 | 9 | 263 | 685 | 941 | ATSS4; transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002274716.1 | 0 | 9 | 263 | 657 | 913 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298514.1 | 0 | 9 | 263 | 533 | 789 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519725.1 | 0 | 9 | 263 | 643 | 899 | starch synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rzv_B | 2e-37 | 26 | 263 | 160 | 388 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
PDB | 1rzv_A | 2e-37 | 26 | 263 | 160 | 388 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
PDB | 1rzu_B | 2e-37 | 26 | 263 | 160 | 388 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
PDB | 1rzu_A | 2e-37 | 26 | 263 | 160 | 388 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
PDB | 3d1j_A | 3e-34 | 9 | 258 | 143 | 384 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
CF828776 | 257 | 9 | 263 | 0 |
GW865616 | 251 | 9 | 257 | 0 |
GO851132 | 257 | 9 | 263 | 0 |
BM413296 | 217 | 11 | 225 | 0 |
BM413296 | 65 | 190 | 250 | 0.00002 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|