Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.010G137300.1 |
Family | GH17 |
Protein Properties | Length: 364 Molecular Weight: 40262.2 Isoelectric Point: 9.1048 |
Chromosome | Chromosome/Scaffold: 10 Start: 31637495 End: 31640511 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 37 | 320 | 0 |
EADNLPVPESVVTLLKAAKVNHIRIYDADHGVLTAFNGSGIEVIVGLPNGYLKELSTGEDRAMNWVKENVQAFLPGTQIRGIAVGNEILGGSDMELWEVL LPAAKNIYGAVYRLGLKEIVQVSSPHSEAVFANSYPPSACIFKPDVVPFMKPLLQLFSQIGSPFYINAYPFLAYKNDPQHIDINYALFKDNPGFNKMEVI VSKTGWASRGDPDKAGATVKNARTYNRHLRKRLTKKKGTPLRPKIPVRAYVFSLFNENSKPGPTSERNFGLFKPDGSIAYDIGF |
Full Sequence |
---|
Protein Sequence Length: 364 Download |
MPKHCFAAQI EKTPGSPEEH HYHLGSFETE VMWQYQEADN LPVPESVVTL LKAAKVNHIR 60 IYDADHGVLT AFNGSGIEVI VGLPNGYLKE LSTGEDRAMN WVKENVQAFL PGTQIRGIAV 120 GNEILGGSDM ELWEVLLPAA KNIYGAVYRL GLKEIVQVSS PHSEAVFANS YPPSACIFKP 180 DVVPFMKPLL QLFSQIGSPF YINAYPFLAY KNDPQHIDIN YALFKDNPGF NKMEVIVSKT 240 GWASRGDPDK AGATVKNART YNRHLRKRLT KKKGTPLRPK IPVRAYVFSL FNENSKPGPT 300 SERNFGLFKP DGSIAYDIGF TGRVPSSAPP LSFKDIAAQG WLRWSYSLLF MACSVVLQQG 360 LGL* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 6.0e-81 | 38 | 320 | 310 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN70046.1 | 0 | 38 | 353 | 37 | 373 | hypothetical protein [Vitis vinifera] |
EMBL | CBI36326.1 | 0 | 38 | 361 | 48 | 397 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002265779.1 | 0 | 38 | 322 | 38 | 351 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299750.1 | 0 | 38 | 327 | 25 | 343 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002327527.1 | 0 | 38 | 331 | 16 | 338 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 37 | 321 | 9 | 316 | A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta |
PDB | 3f55_C | 0 | 37 | 321 | 9 | 316 | A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta |
PDB | 3f55_B | 0 | 37 | 321 | 9 | 316 | A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta |
PDB | 3f55_A | 0 | 37 | 321 | 9 | 316 | A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta |
PDB | 3em5_D | 0 | 37 | 321 | 9 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
JK988667 | 271 | 38 | 279 | 0 |
EL455956 | 284 | 38 | 292 | 0 |
FY444355 | 266 | 84 | 320 | 0 |
FS331556 | 205 | 25 | 228 | 0 |
EX270328 | 238 | 155 | 358 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|