Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.010G162800.3 |
Family | CBM57 |
Protein Properties | Length: 834 Molecular Weight: 93248.9 Isoelectric Point: 6.5132 |
Chromosome | Chromosome/Scaffold: 10 Start: 46906071 End: 46917849 |
Description | receptor-like kinase in flowers 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 405 | 592 | 5.4e-23 |
LHVNCGGKGTRIKEHKTNILYEGDGDVEGGAAKYYIKEDTYWGFSSTGDFMDDNDFQNTRYTVSKPLSNISELYTTARRAPISLTYFHYCLENGNYTITF NFAELQFTPDEAYNSLGRRIFDIYVQEKLVWKDFNIESEAKGSLKPLVKQISNVSVTTNFLAIRFFWDGKGTTRIPQRSAYGPLVSAI |
Full Sequence |
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Protein Sequence Length: 834 Download |
MVTKKLFVFW IIAMGCFSLL RYSESKVPEE EVDALEEITT AMGSTYWKFI GDSCEIEMVG 60 VTLVPPKNSE HEISCECEAD GTVCHVVRIA IKGYNLPGIL PPQLVKLPYL REIDFAYNYL 120 NGTIPIEWAS MKLTSISLLV NRLSGEIPKY LGNITTLTYL SLEANQFSGP VPPELGNLVN 180 LTTLMLSSNQ LTGNLPVTFS LLKNLTDLRI NDNNFNGTIP GFILNWEQLS RLEMHASGLT 240 GPIPVSLSPL RNLLVLRISD ISGPSQDFPV LRDMKGLVTL VLRSCNISGE IPDYIWAMKN 300 LEMLDLSFNK LVGKIPTRIS SDRLRFVFLS GNMLSGDVPD SILKQGSSID LSYNNFEWQG 360 PEKPVCQENM NLNLNLFCSS SSRNNLRGAL PCKKDFTCPQ YSNCLHVNCG GKGTRIKEHK 420 TNILYEGDGD VEGGAAKYYI KEDTYWGFSS TGDFMDDNDF QNTRYTVSKP LSNISELYTT 480 ARRAPISLTY FHYCLENGNY TITFNFAELQ FTPDEAYNSL GRRIFDIYVQ EKLVWKDFNI 540 ESEAKGSLKP LVKQISNVSV TTNFLAIRFF WDGKGTTRIP QRSAYGPLVS AISVISDSKP 600 CSKRKNNGSS YAIVVGVLGS CLVLFTLGIL WWKGHLLVKY WRKEDTKEDS SSGNFTLKQI 660 KVATDDFDPA NKIGEGGFGP VYKGQLSDGT RIAVKQLSSK SRQGNREFLN EIGMISCLQH 720 PNLVKLHGFC VEGDQLLLVY EYMENNSLAR ALFGSENNQL ELDWPTRLRI CIGIAKGLAF 780 LHEESRLKIV HRDIKATNVL LDSDLNPKIS DFGLARLDEE EKTHITTRVA GTM* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00113 | PLN00113 | 1.0e-24 | 95 | 339 | 251 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 7.0e-33 | 93 | 365 | 333 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 1.0e-36 | 93 | 356 | 271 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 4.0e-41 | 77 | 362 | 319 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
pfam11721 | Malectin | 1.0e-52 | 404 | 592 | 190 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
Gene Ontology | |
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GO Term | Description |
GO:0004672 | protein kinase activity |
GO:0005515 | protein binding |
GO:0005524 | ATP binding |
GO:0006468 | protein phosphorylation |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC50043.1 | 0 | 6 | 833 | 21 | 846 | receptor-like serine/threonine kinase [Arabidopsis thaliana] |
RefSeq | NP_174268.7 | 0 | 6 | 833 | 21 | 847 | RKF1 (RECEPTOR-LIKE KINASE IN FLOWERS 1); ATP binding / kinase/ protein serine/threonine kinase/ receptor signaling protein serine/threonine kinase [Arabidopsis thaliana] |
RefSeq | NP_850955.5 | 0 | 32 | 833 | 32 | 832 | RKF1 (RECEPTOR-LIKE KINASE IN FLOWERS 1); ATP binding / kinase/ protein serine/threonine kinase/ receptor signaling protein serine/threonine kinase [Arabidopsis thaliana] |
RefSeq | XP_002264679.1 | 0 | 31 | 833 | 5 | 833 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305711.1 | 0 | 32 | 833 | 1 | 767 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ulz_A | 0 | 654 | 833 | 19 | 199 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3uim_A | 0 | 654 | 833 | 19 | 199 | A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation |
PDB | 3tl8_H | 0 | 654 | 833 | 27 | 207 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3tl8_G | 0 | 654 | 833 | 27 | 207 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3tl8_D | 0 | 654 | 833 | 27 | 207 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |