Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.010G173200.1 |
Family | CE8 |
Protein Properties | Length: 587 Molecular Weight: 64382.6 Isoelectric Point: 8.2934 |
Chromosome | Chromosome/Scaffold: 10 Start: 50516422 End: 50520118 |
Description | pectin methylesterase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 279 | 571 | 0 |
NVIVAQDGSGNVLTINDAVKLVGKKNESRFVIYVKEGKYVENVILDKHMWNVMIYGDGKTKTLISGSHNFVDGTPTFATATFAVAGKGFIAKGIGFINTA GAAKHQAVAMRSGSDRSVFYRCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQSCNILPRQPLANQFNTITAQGKKDPNQNTGICIQKCSIS AFGNLTAKTYLGRPWKEFSTTVIMQSKIGAFLDPVGWKGWVANVDPPISIFYAEYQNSGPGSNVDNRVKWAGYRSTLSDVDAGKFTVETFIQG |
Full Sequence |
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Protein Sequence Length: 587 Download |
MDSINSFKGY GKVDEVEELA FRRKKRRRLI TLIILILLLL TLITAAVVGI FLHKRSSSSP 60 NTLPPPVLTP AASLKAVCSV TQYPASCFSS ISSIAPSNTT VPELLFKLSL KVAIDELSSL 120 SHYPTKLKAE TNDIRLKSAL QVCETMFDDA LDRLNDSATS LEVGEGEKLL SDSKISDLKT 180 WLSTAITDQE TCLDSLEELN ATKHFNATVV EEMKAAMQNS TEYASNSLAI VARILGLLTD 240 LNIRIHRRLL GFEKAGSEFP AWVSPTERRL LQESKPTPNV IVAQDGSGNV LTINDAVKLV 300 GKKNESRFVI YVKEGKYVEN VILDKHMWNV MIYGDGKTKT LISGSHNFVD GTPTFATATF 360 AVAGKGFIAK GIGFINTAGA AKHQAVAMRS GSDRSVFYRC AFDAYQDTLY AHSNRQFYRE 420 CDILGTIDFI FGNAAVVFQS CNILPRQPLA NQFNTITAQG KKDPNQNTGI CIQKCSISAF 480 GNLTAKTYLG RPWKEFSTTV IMQSKIGAFL DPVGWKGWVA NVDPPISIFY AEYQNSGPGS 540 NVDNRVKWAG YRSTLSDVDA GKFTVETFIQ GHDWLPNATV SYEPAL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 3.0e-139 | 45 | 582 | 552 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 2.0e-140 | 56 | 575 | 537 | + Putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 6.0e-164 | 279 | 571 | 298 | + Pectinesterase. | ||
PLN02314 | PLN02314 | 0 | 1 | 586 | 587 | + pectinesterase | ||
PLN02468 | PLN02468 | 0 | 7 | 586 | 587 | + putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM65650.1 | 0 | 1 | 580 | 1 | 581 | pectinesterase, putative [Arabidopsis thaliana] |
RefSeq | NP_175787.1 | 0 | 1 | 580 | 1 | 581 | ATPME1; pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002265217.1 | 0 | 1 | 586 | 1 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304256.1 | 0 | 1 | 586 | 1 | 588 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532945.1 | 0 | 1 | 586 | 1 | 589 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 272 | 586 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 279 | 586 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 0.000000000000006 | 277 | 576 | 3 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 0.000000000000006 | 277 | 576 | 3 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 0.000000000000006 | 277 | 576 | 3 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |