| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.010G181000.1 |
| Family | AA1 |
| Protein Properties | Length: 543 Molecular Weight: 61159.5 Isoelectric Point: 9.7975 |
| Chromosome | Chromosome/Scaffold: 10 Start: 52854903 End: 52860222 |
| Description | SKU5 similar 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 36 | 497 | 0 |
| GDIYPLGVKQQGILINGQFPGPHIDAVTNDNLIISVYNYLNEPFLISWNGVQQRRNSWQDGVSGTNCPIRPGKNFTYVLQVKDQIGSFYYFPSLLFHKAA GGYGAIRIWSRPKIPVPFPSPAGDFTVLAGDWYKTNHYVLRRLLDSGHNLPFPDGLLINGRGWNGYTFTVDPGRTYRFRVSNVGLTTSINFRIQGHKLKL IEVEGSHTLQNTYTSFDIHLGQSCSFLVTADQIPQDYYVVASTRFTRRVLTTTAVLHYSNSKRGVSGPVPGAPTIQIAPSVMQARSIRWNLTASGPRPNP QGSYHYGLITPSRTIMLSNSAPYINGKQRYAVNGVSYVPADTPLKIADYFKIPGVFNLGSIPTWPPSGNNAYFQTSVMAANFREYVEIVFQNWEDTVQSW HIDGYSFFVVGMNGGQWTPASRSSYNLRDTVARCTTQVYPRSWTAIYMALDNVGMWNIRSEN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 543 Download |
| MGDSKLILCC FIACILFLGV NGENPYRYIT WKVTYGDIYP LGVKQQGILI NGQFPGPHID 60 AVTNDNLIIS VYNYLNEPFL ISWNGVQQRR NSWQDGVSGT NCPIRPGKNF TYVLQVKDQI 120 GSFYYFPSLL FHKAAGGYGA IRIWSRPKIP VPFPSPAGDF TVLAGDWYKT NHYVLRRLLD 180 SGHNLPFPDG LLINGRGWNG YTFTVDPGRT YRFRVSNVGL TTSINFRIQG HKLKLIEVEG 240 SHTLQNTYTS FDIHLGQSCS FLVTADQIPQ DYYVVASTRF TRRVLTTTAV LHYSNSKRGV 300 SGPVPGAPTI QIAPSVMQAR SIRWNLTASG PRPNPQGSYH YGLITPSRTI MLSNSAPYIN 360 GKQRYAVNGV SYVPADTPLK IADYFKIPGV FNLGSIPTWP PSGNNAYFQT SVMAANFREY 420 VEIVFQNWED TVQSWHIDGY SFFVVGMNGG QWTPASRSSY NLRDTVARCT TQVYPRSWTA 480 IYMALDNVGM WNIRSENWAR QYLGQQFYLR VYSPANSWRD ELPIPKNALL CGRARGRHTR 540 PF* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02835 | PLN02835 | 0 | 5 | 539 | 536 | + oxidoreductase | ||
| PLN02991 | PLN02991 | 0 | 12 | 539 | 530 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 20 | 539 | 522 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 0 | 1 | 536 | 543 | + copper ion binding / oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 31 | 535 | 516 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95805.1 | 0 | 1 | 542 | 1 | 544 | unknown [Populus trichocarpa] |
| RefSeq | NP_193932.1 | 0 | 9 | 542 | 4 | 541 | sks4 (SKU5 Similar 4); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | XP_002272880.1 | 0 | 7 | 542 | 6 | 540 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002332613.1 | 0 | 1 | 542 | 1 | 544 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518462.1 | 0 | 20 | 542 | 20 | 541 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 27 | 532 | 4 | 539 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 1asq_A | 0 | 27 | 532 | 4 | 539 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 1asp_B | 0 | 27 | 532 | 4 | 539 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 1asp_A | 0 | 27 | 532 | 4 | 539 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 1aso_B | 0 | 27 | 532 | 4 | 539 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
