| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.010G181000.3 |
| Family | AA1 |
| Protein Properties | Length: 485 Molecular Weight: 54604.1 Isoelectric Point: 9.6808 |
| Chromosome | Chromosome/Scaffold: 10 Start: 52855690 End: 52860222 |
| Description | SKU5 similar 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 182 | 439 | 0 |
| GSHTLQNTYTSFDIHLGQSCSFLVTADQIPQDYYVVASTRFTRRVLTTTAVLHYSNSKRGVSGPVPGAPTIQIAPSVMQARSIRWNLTASGPRPNPQGSY HYGLITPSRTIMLSNSAPYINGKQRYAVNGVSYVPADTPLKIADYFKIPGVFNLGSIPTWPPSGNNAYFQTSVMAANFREYVEIVFQNWEDTVQSWHIDG YSFFVVGMNGGQWTPASRSSYNLRDTVARCTTQVYPRSWTAIYMALDNVGMWNIRSEN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 485 Download |
| MGDSKLILCC FIACILFLGV NGENPYRYIT WKVTYGDIYP LGVKQQGILI NGQFPGPHID 60 AVTNDNLIIS VYNYLNEPFL ISWNGVQQRR NSWQDGVSGT NCPIRPGKNF TYVLQVKDQI 120 GSFYYFPSLL FHKAAGGYGA IRIWSRPKIP VPFPSPAGDF TVLAGDWYKT NHYVLRRLLD 180 SGSHTLQNTY TSFDIHLGQS CSFLVTADQI PQDYYVVAST RFTRRVLTTT AVLHYSNSKR 240 GVSGPVPGAP TIQIAPSVMQ ARSIRWNLTA SGPRPNPQGS YHYGLITPSR TIMLSNSAPY 300 INGKQRYAVN GVSYVPADTP LKIADYFKIP GVFNLGSIPT WPPSGNNAYF QTSVMAANFR 360 EYVEIVFQNW EDTVQSWHID GYSFFVVGMN GGQWTPASRS SYNLRDTVAR CTTQVYPRSW 420 TAIYMALDNV GMWNIRSENW ARQYLGQQFY LRVYSPANSW RDELPIPKNA LLCGRARGRH 480 TRPF* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02792 | PLN02792 | 5.0e-76 | 20 | 182 | 163 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 3.0e-134 | 182 | 481 | 300 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 3.0e-152 | 31 | 477 | 518 | + copper ion binding / pectinesterase | ||
| PLN02835 | PLN02835 | 0 | 5 | 481 | 534 | + oxidoreductase | ||
| PLN02991 | PLN02991 | 0 | 12 | 481 | 529 | + oxidoreductase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95805.1 | 0 | 1 | 484 | 1 | 544 | unknown [Populus trichocarpa] |
| RefSeq | NP_193932.1 | 0 | 9 | 484 | 4 | 541 | sks4 (SKU5 Similar 4); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | XP_002272880.1 | 0 | 7 | 484 | 6 | 540 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002332613.1 | 0 | 1 | 484 | 1 | 544 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518462.1 | 0 | 20 | 484 | 20 | 541 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 3e-19 | 171 | 474 | 233 | 539 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 1asq_B | 0.000000000000006 | 27 | 232 | 4 | 224 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 1asq_A | 3e-19 | 171 | 474 | 233 | 539 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 1asq_A | 0.000000000000006 | 27 | 232 | 4 | 224 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 1asp_B | 3e-19 | 171 | 474 | 233 | 539 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
