| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.010G186400.2 |
| Family | GH5 |
| Protein Properties | Length: 448 Molecular Weight: 50207.4 Isoelectric Point: 9.1062 |
| Chromosome | Chromosome/Scaffold: 10 Start: 53751058 End: 53754083 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 63 | 391 | 4.3e-33 |
| NQSTFYINGWNSYWLMQESVWAGPSRSRVSKMLKKGAEMGLTVCRTWAFNDGVGPNALQISPGVFNERVFRGLDYVIVEARKRGIRLILSLVNNLSNFGG KAQYVRWAQEAGHNVSSSTDSFFSHPMIKDYYKAYVKAILSRKNSLSGVKYADEPAIFAWELMNEPRCSSSSSAPILQAWLNEMAAFVKSLDQKHLVTVG LEGFYGLNTTKGLEVNPGEWAASLGSDFIQNSAIENIDFASIHAYPDSWMPHDDMEAKARFLSRWVDSHISDGDHVLKKPVIFTEVGSLVHADNQGLADK DILLKTMYEKIYESAKKRQAGAGALIWQL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 448 Download |
| MASDWRDKKL YPLLGILLLS IFLYFNLGSN PITFPILWQS HMGFVSANST HFIIVNPRAP 60 LENQSTFYIN GWNSYWLMQE SVWAGPSRSR VSKMLKKGAE MGLTVCRTWA FNDGVGPNAL 120 QISPGVFNER VFRGLDYVIV EARKRGIRLI LSLVNNLSNF GGKAQYVRWA QEAGHNVSSS 180 TDSFFSHPMI KDYYKAYVKA ILSRKNSLSG VKYADEPAIF AWELMNEPRC SSSSSAPILQ 240 AWLNEMAAFV KSLDQKHLVT VGLEGFYGLN TTKGLEVNPG EWAASLGSDF IQNSAIENID 300 FASIHAYPDS WMPHDDMEAK ARFLSRWVDS HISDGDHVLK KPVIFTEVGS LVHADNQGLA 360 DKDILLKTMY EKIYESAKKR QAGAGALIWQ LLVEGVGEYS DRFSFVAWDN PSTYKLILKQ 420 SCRLKSIFAK SIQSRKLNKD PCSGNLP* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam00150 | Cellulase | 0.0008 | 167 | 391 | 233 | + Cellulase (glycosyl hydrolase family 5). |
| COG2730 | BglC | 0.0004 | 60 | 229 | 179 | + Endoglucanase [Carbohydrate transport and metabolism] |
| COG3934 | COG3934 | 3.0e-22 | 95 | 402 | 309 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN77937.1 | 0 | 1 | 446 | 1 | 445 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI33116.1 | 0 | 1 | 444 | 1 | 441 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002272403.1 | 0 | 1 | 446 | 1 | 445 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002307872.1 | 0 | 42 | 436 | 1 | 393 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002520563.1 | 0 | 1 | 436 | 1 | 431 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 40 | 427 | 2 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 57 | 402 | 16 | 351 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 57 | 402 | 16 | 351 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 57 | 402 | 16 | 351 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 57 | 402 | 16 | 351 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
