| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.010G194400.1 |
| Family | AA1 |
| Protein Properties | Length: 354 Molecular Weight: 39082.2 Isoelectric Point: 7.8043 |
| Chromosome | Chromosome/Scaffold: 10 Start: 55365272 End: 55366797 |
| Description | laccase 5 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 22 | 350 | 0 |
| AEVQRHRFVIQATKVKRLCKTHNIITVNGMFPGPTLEIKNGDTLEVQVVNKARYNVTIHWHGVRQMRTGWADGPDFVTRCPIRPGGSCTYRFTVQGQEGT LWWHAHSSWLRATVYGALESFSVTNTNDYDDQSEMEATRTGAAPNVSDAYTINAQSGDLYKCSSKETTVVPIDSGETNLLRVINAALNQPLFFKVANHKL TVVGADASYTKPFTTSVLMLGPGQTTDVLIQGDQPPSRHYMAARDYQRAQNAPFDNTATTAILEYKFASCAAKKCNGPTPIMPSLPAYNDTNTVTAFSQS FRSREKAEVPTDIDESLFFTIGLELNNCP | |||
| Full Sequence |
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| Protein Sequence Length: 354 Download |
| MGIFNKFSFI FLVIFLALSA NAEVQRHRFV IQATKVKRLC KTHNIITVNG MFPGPTLEIK 60 NGDTLEVQVV NKARYNVTIH WHGVRQMRTG WADGPDFVTR CPIRPGGSCT YRFTVQGQEG 120 TLWWHAHSSW LRATVYGALE SFSVTNTNDY DDQSEMEATR TGAAPNVSDA YTINAQSGDL 180 YKCSSKETTV VPIDSGETNL LRVINAALNQ PLFFKVANHK LTVVGADASY TKPFTTSVLM 240 LGPGQTTDVL IQGDQPPSRH YMAARDYQRA QNAPFDNTAT TAILEYKFAS CAAKKCNGPT 300 PIMPSLPAYN DTNTVTAFSQ SFRSREKAEV PTDIDESLFF TIGLELNNCP PNL* 360 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02191 | PLN02191 | 4.0e-33 | 10 | 320 | 352 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 2.0e-40 | 1 | 326 | 366 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 8.0e-43 | 40 | 340 | 350 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| pfam07732 | Cu-oxidase_3 | 8.0e-52 | 30 | 139 | 112 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| TIGR03389 | laccase | 1.0e-160 | 22 | 352 | 354 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK92474.1 | 0 | 20 | 353 | 4 | 354 | unknown [Populus trichocarpa] |
| EMBL | CAN75316.1 | 0 | 22 | 353 | 31 | 381 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI25418.1 | 0 | 22 | 353 | 31 | 381 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002273875.1 | 0 | 22 | 353 | 31 | 381 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002315131.1 | 0 | 8 | 352 | 14 | 378 | laccase 90c [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3sqr_A | 5e-27 | 42 | 301 | 85 | 364 | A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution |
| PDB | 3v9e_A | 5e-27 | 42 | 301 | 85 | 364 | A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada |
| PDB | 3div_A | 1e-26 | 46 | 304 | 25 | 299 | A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution |
| PDB | 3pxl_A | 3e-26 | 46 | 304 | 25 | 299 | A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta |
| PDB | 3v9c_A | 3e-26 | 46 | 304 | 25 | 299 | A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta |
| Signal Peptide | ||||
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| Cleavage Site | ||||
| 22 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX658195 | 282 | 19 | 281 | 0 |
| DY972293 | 289 | 7 | 276 | 0 |
| DY263574 | 388 | 5 | 353 | 0 |
| DV465023 | 252 | 21 | 250 | 0 |
| FC917752 | 267 | 5 | 246 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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