Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.010G216700.1 |
Family | CE8 |
Protein Properties | Length: 434 Molecular Weight: 48594.3 Isoelectric Point: 10.0698 |
Chromosome | Chromosome/Scaffold: 10 Start: 58490609 End: 58492168 |
Description | root hair specific 12 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 125 | 418 | 0 |
DIIVAKDGSGKFKTIMEAIKAVPKKSKKKRTVIYVKKGVYKENVKVEKNKWNVTMIGDGMNSTIVTGKLNVVDGTPTFSTATFAVFGKGFVARDMAFVNT AGPEKHQAVALMSTADQSVFHRCRFDGFQDTLYAHSNRQFYRECDIIGTVDFMFGNSAVVFQNCNILPRQPMANQQNTITAQGKVDPNQNTGISIQNCTI SPYGNLSSSLKTYLGRPWKNYSTTVFMHSQIGSLVHPTGWLPWTGNTAPSTIFYSEYKNVGPGSSMKDRVKWKGLRNISDKEAKKFTVKEFING |
Full Sequence |
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Protein Sequence Length: 434 Download |
MENCRQLLGL AIDHLNSSLS SSTDSVDDLR TWLSSAVTYH QTCIDGFEEF NGVINRDDID 60 NHLKFSSEVT SNSLAIITWI SKVKTAFNLR RRRLMNLEAR EEHQWRSHRE RVLLESSNEL 120 KKKADIIVAK DGSGKFKTIM EAIKAVPKKS KKKRTVIYVK KGVYKENVKV EKNKWNVTMI 180 GDGMNSTIVT GKLNVVDGTP TFSTATFAVF GKGFVARDMA FVNTAGPEKH QAVALMSTAD 240 QSVFHRCRFD GFQDTLYAHS NRQFYRECDI IGTVDFMFGN SAVVFQNCNI LPRQPMANQQ 300 NTITAQGKVD PNQNTGISIQ NCTISPYGNL SSSLKTYLGR PWKNYSTTVF MHSQIGSLVH 360 PTGWLPWTGN TAPSTIFYSE YKNVGPGSSM KDRVKWKGLR NISDKEAKKF TVKEFINGGK 420 WISDAGVSYK SGL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02745 | PLN02745 | 7.0e-147 | 1 | 433 | 446 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 3.0e-150 | 31 | 433 | 407 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 1.0e-173 | 125 | 418 | 298 | + Pectinesterase. | ||
PLN02314 | PLN02314 | 9.0e-176 | 30 | 433 | 415 | + pectinesterase | ||
PLN02468 | PLN02468 | 0 | 1 | 433 | 438 | + putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN80988.1 | 0 | 1 | 433 | 125 | 559 | hypothetical protein [Vitis vinifera] |
EMBL | CBI29155.1 | 0 | 1 | 433 | 136 | 561 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002273396.1 | 0 | 1 | 433 | 139 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316458.1 | 0 | 1 | 433 | 139 | 569 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515781.1 | 0 | 1 | 433 | 140 | 573 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 124 | 433 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 125 | 433 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 1e-22 | 127 | 421 | 7 | 337 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 1e-22 | 127 | 421 | 7 | 337 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 1e-22 | 127 | 421 | 7 | 337 | A Chain A, Pectin Methylesterase From Carrot |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CK606467 | 239 | 196 | 434 | 0 |
ES902145 | 260 | 175 | 434 | 0 |
BQ517825 | 234 | 197 | 429 | 0 |
DT755207 | 262 | 175 | 434 | 0 |
GO922369 | 257 | 175 | 429 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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