| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.010G238600.1 |
| Family | GH47 |
| Protein Properties | Length: 645 Molecular Weight: 72137.6 Isoelectric Point: 6.6369 |
| Chromosome | Chromosome/Scaffold: 10 Start: 60852431 End: 60857376 |
| Description | alpha-mannosidase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH47 | 143 | 627 | 0 |
| AFTHAWSGYKKFAMGYDELLPLSMQGFDGLGGLGATVVDSLDTAMIMGLEEVVSEAGSWIESNLLDRISQKGDVNLFETTIRVLGGLLSAYHLSGGDQDM NLANTGPKPTIYLEIAKNLADRLLSAFTSSPTPIPYSDVLLKNSSAHPASNLLSSTSEVSTLQLEFNYLSAISGDPKYKTEGMKVFAHFKTLPKVEGLVP IYISPHSGEFIGQEIRLGSRGDSYYEYLIKVWLQLRSIQDGNFTYLYDMYEEAMRGVRHLLVQKTIPNELVFVGELPGGSKGSFSPKMDHLVCFLPGTLA LGATKGITKEKAMKDNLLTIEDFENLKLAEDLAKTCFEMYSVTSTGLAPEIAYFHTKDFYEDGLGGGNQSSEYVNDIIIKFNDRHNLLRPETVESLFVLY RITQDPKYREWGWQIFQSFEKYTKVDSGGYTSLNDVTTLPPQRRDKMETFFLGETLKYLYLLFGDSSVIPLDKFVFNTEAHPFPI | |||
| Full Sequence |
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| Protein Sequence Length: 645 Download |
| MSKSLPYSVK DVHYDNAKFR HRSFFKVITQ TLFTSDMKRE CVSCSTGKFL GLFMIFGLAC 60 LMLTHASKTP SVTDGLSKVL GTNEEQKVVT DVGLRFKKLL RRAPRLPPRL SGNEKVSSGI 120 FTGKPNDHDE EKWKARQRNV KEAFTHAWSG YKKFAMGYDE LLPLSMQGFD GLGGLGATVV 180 DSLDTAMIMG LEEVVSEAGS WIESNLLDRI SQKGDVNLFE TTIRVLGGLL SAYHLSGGDQ 240 DMNLANTGPK PTIYLEIAKN LADRLLSAFT SSPTPIPYSD VLLKNSSAHP ASNLLSSTSE 300 VSTLQLEFNY LSAISGDPKY KTEGMKVFAH FKTLPKVEGL VPIYISPHSG EFIGQEIRLG 360 SRGDSYYEYL IKVWLQLRSI QDGNFTYLYD MYEEAMRGVR HLLVQKTIPN ELVFVGELPG 420 GSKGSFSPKM DHLVCFLPGT LALGATKGIT KEKAMKDNLL TIEDFENLKL AEDLAKTCFE 480 MYSVTSTGLA PEIAYFHTKD FYEDGLGGGN QSSEYVNDII IKFNDRHNLL RPETVESLFV 540 LYRITQDPKY REWGWQIFQS FEKYTKVDSG GYTSLNDVTT LPPQRRDKME TFFLGETLKY 600 LYLLFGDSSV IPLDKFVFNT EAHPFPIKDA IYLEGGSNMM KGIM* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PTZ00470 | PTZ00470 | 3.0e-175 | 120 | 629 | 513 | + glycoside hydrolase family 47 protein; Provisional | ||
| pfam01532 | Glyco_hydro_47 | 0 | 143 | 627 | 488 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG52061.1 | 0 | 123 | 628 | 52 | 558 | AC022455_15 endoplasmic reticulum alpha-mannosidase, putative; 33510-31408 [Arabidopsis thaliana] |
| RefSeq | NP_564345.1 | 0 | 1 | 628 | 1 | 621 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
| RefSeq | XP_002275664.1 | 0 | 1 | 628 | 1 | 633 | PREDICTED: similar to glycoside hydrolase family 47 protein [Vitis vinifera] |
| RefSeq | XP_002306001.1 | 0 | 1 | 628 | 1 | 629 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519694.1 | 0 | 1 | 628 | 1 | 620 | endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1fmi_A | 0 | 136 | 627 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo3_A | 0 | 136 | 627 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo2_A | 0 | 136 | 627 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1x9d_A | 0 | 136 | 627 | 88 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 1dl2_A | 0 | 134 | 637 | 4 | 504 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| GO845862 | 338 | 271 | 608 | 0 |
| EX266875 | 361 | 238 | 595 | 0 |
| CO076473 | 285 | 277 | 561 | 0 |
| ES806438 | 323 | 195 | 511 | 0 |
| JG451037 | 274 | 345 | 618 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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