Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G003300.1 |
Family | GT14 |
Protein Properties | Length: 414 Molecular Weight: 47225.8 Isoelectric Point: 6.8706 |
Chromosome | Chromosome/Scaffold: 11 Start: 272948 End: 277823 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 64 | 300 | 0 |
LAYWISGSKGDSNKMVRLLKAIYHPRNQYLLQLDSGSSDYERENLGFLIESETVLQTFGNVNVEGKSYAVNKMGSSALAATLHAAALLLKINSDWDWFIP LSASSYPLMNQDDLLHAFTFLPRDLNFIDYISNPGWKQRGEINRIVVDPNLYYKSNTPINYDVETRKPDAFEIFGGSPWVILSRSFMEFCIYGWDNIPRK LLMYFTNVAYPLETYFHTVICNSFEFQNTTLSNDLRY |
Full Sequence |
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Protein Sequence Length: 414 Download |
MRISKVYSWF YGYYPWMVVF ATTLVLFGSL SKSSNNQDEV PLKASKFQKP LRLPNKGYGY 60 PPVLAYWISG SKGDSNKMVR LLKAIYHPRN QYLLQLDSGS SDYERENLGF LIESETVLQT 120 FGNVNVEGKS YAVNKMGSSA LAATLHAAAL LLKINSDWDW FIPLSASSYP LMNQDDLLHA 180 FTFLPRDLNF IDYISNPGWK QRGEINRIVV DPNLYYKSNT PINYDVETRK PDAFEIFGGS 240 PWVILSRSFM EFCIYGWDNI PRKLLMYFTN VAYPLETYFH TVICNSFEFQ NTTLSNDLRY 300 DIIPKSPKPK ILNTSKYGEI VAGESVFAQP IQEDDPLLNM IDEDVLHRMP DNFVPGSWSS 360 CQGINQGEDL CYRWADIDTV KPGSKGIKLA SLLTKLVEER RHNPSQCHQQ RGP* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 2.0e-47 | 64 | 300 | 237 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 1.0e-100 | 26 | 407 | 386 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33324.1 | 0 | 53 | 409 | 54 | 415 | secondary cell wall-related glycosyltransferase family 14 [Populus tremula x Populus tremuloides] |
GenBank | ABR16364.1 | 0 | 56 | 410 | 67 | 423 | unknown [Picea sitchensis] |
RefSeq | XP_002284096.1 | 0 | 44 | 407 | 34 | 400 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310932.1 | 0 | 53 | 409 | 33 | 394 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515811.1 | 0 | 35 | 396 | 16 | 389 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00000003 | 80 | 282 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00000003 | 80 | 282 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00000003 | 80 | 282 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00000003 | 80 | 282 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0000001 | 80 | 282 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |