| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.011G003300.2 |
| Family | GT14 |
| Protein Properties | Length: 337 Molecular Weight: 38439.6 Isoelectric Point: 5.2105 |
| Chromosome | Chromosome/Scaffold: 11 Start: 273211 End: 277810 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 2 | 223 | 0 |
| VRLLKAIYHPRNQYLLQLDSGSSDYERENLGFLIESETVLQTFGNVNVEGKSYAVNKMGSSALAATLHAAALLLKINSDWDWFIPLSASSYPLMNQDDLL HAFTFLPRDLNFIDYISNPGWKQRGEINRIVVDPNLYYKSNTPINYDVETRKPDAFEIFGGSPWVILSRSFMEFCIYGWDNIPRKLLMYFTNVAYPLETY FHTVICNSFEFQNTTLSNDLRY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 337 Download |
| MVRLLKAIYH PRNQYLLQLD SGSSDYEREN LGFLIESETV LQTFGNVNVE GKSYAVNKMG 60 SSALAATLHA AALLLKINSD WDWFIPLSAS SYPLMNQDDL LHAFTFLPRD LNFIDYISNP 120 GWKQRGEINR IVVDPNLYYK SNTPINYDVE TRKPDAFEIF GGSPWVILSR SFMEFCIYGW 180 DNIPRKLLMY FTNVAYPLET YFHTVICNSF EFQNTTLSND LRYDIIPKSP KPKILNTSKY 240 GEIVAGESVF AQPIQEDDPL LNMIDEDVLH RMPDNFVPGS WSSCQGINQG EDLCYRWADI 300 DTVKPGSKGI KLASLLTKLV EERRHNPSQC HQQRGP* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 3.0e-45 | 3 | 223 | 221 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 8.0e-94 | 3 | 330 | 332 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX33324.1 | 0 | 1 | 332 | 79 | 415 | secondary cell wall-related glycosyltransferase family 14 [Populus tremula x Populus tremuloides] |
| GenBank | ABR16364.1 | 0 | 1 | 333 | 89 | 423 | unknown [Picea sitchensis] |
| RefSeq | XP_002284096.1 | 0 | 1 | 330 | 69 | 400 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310932.1 | 0 | 1 | 332 | 58 | 394 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515811.1 | 0 | 1 | 319 | 61 | 389 | acetylglucosaminyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.00000002 | 3 | 205 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.00000002 | 3 | 205 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.00000002 | 3 | 205 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.00000002 | 3 | 205 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.00000005 | 3 | 205 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| ES809218 | 329 | 1 | 327 | 0 |
| CO084020 | 251 | 1 | 251 | 0 |
| GR710096 | 237 | 1 | 237 | 0 |
| ES847067 | 208 | 130 | 337 | 0 |
| CO084019 | 196 | 142 | 337 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
