Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G003500.5 |
Family | GH47 |
Protein Properties | Length: 534 Molecular Weight: 60284.4 Isoelectric Point: 6.2116 |
Chromosome | Chromosome/Scaffold: 11 Start: 286903 End: 296648 |
Description | alpha-mannosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 152 | 502 | 0 |
VVGGLLSTYDLSGDNIFLEKARDIADRLLPAWDTPSGIPYNIIDLAHGNAHNPGWTGGDSILADSGTEQLEFIALSQRTGDPKYQEKVEKAIVALNKTFP ADGLVPIYVNPNDGTAYGTITFGAMGDSFYEYLLKAWIQGNKTSSVKPYRDMWETSMKGLVSLIRRSSPSSFAYICEKTRETLTDKMDELACFAPGMLAL GSSGYGKVEAKKILSLAEELAWTCYNFYQSTHTKLSGENYLFNPGRDMSVGTTWNILRPETVESLFYLWRLTGNVTYQEWGWNIFQAFEKNCRIESGYVG LTDVNLALKDNKMQTFFLAETLKYLYLLFSPPTVIPLDEWVFNTEAHPLRI |
Full Sequence |
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Protein Sequence Length: 534 Download |
MARIRSSSSS SKFRYCNPSY YLKRPKRLAL LLILFVSASS FVWDRQTLVR EHEFEVSKLN 60 DEVRRLQNML EEFTNRVPAN VPIEMQRREK VKEAMIHAWS AYEKYAWGND ELLPQTQSGE 120 NSFGGLGATI IDSLDTLLIM GLDEQFQKAR EVVGGLLSTY DLSGDNIFLE KARDIADRLL 180 PAWDTPSGIP YNIIDLAHGN AHNPGWTGGD SILADSGTEQ LEFIALSQRT GDPKYQEKVE 240 KAIVALNKTF PADGLVPIYV NPNDGTAYGT ITFGAMGDSF YEYLLKAWIQ GNKTSSVKPY 300 RDMWETSMKG LVSLIRRSSP SSFAYICEKT RETLTDKMDE LACFAPGMLA LGSSGYGKVE 360 AKKILSLAEE LAWTCYNFYQ STHTKLSGEN YLFNPGRDMS VGTTWNILRP ETVESLFYLW 420 RLTGNVTYQE WGWNIFQAFE KNCRIESGYV GLTDVNLALK DNKMQTFFLA ETLKYLYLLF 480 SPPTVIPLDE WVFNTEAHPL RIVNRNDNIA GSERQHKPTV GLQGRKTGRF GGN* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3116 | FtsL | 0.008 | 28 | 96 | 81 | + Cell division protein [Cell division and chromosome partitioning] | ||
TIGR03897 | lanti_2_LanM | 0.001 | 107 | 243 | 153 | + type 2 lantibiotic biosynthesis protein LanM. Members of this family are known generally as LanM, a multifunctional enzyme of lantibiotic biosynthesis. This catalysis by LanM distinguishes the type 2 lantibiotics, such as mersacidin, cinnamycin, and lichenicidin, from LanBC-produced type 1 lantibiotics such as nisin and subtilin. The N-terminal domain contains regions associated with Ser and Thr dehydration. The C-terminal region contains a pfam05147 domain, which catalyzes the formation of the lanthionine bridge [Cellular processes, Toxin production and resistance]. | ||
PTZ00470 | PTZ00470 | 1.0e-180 | 87 | 506 | 454 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 0 | 94 | 502 | 451 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK92711.1 | 0 | 1 | 530 | 1 | 569 | putative mannosidase [Arabidopsis thaliana] |
EMBL | CBI18472.1 | 0 | 1 | 529 | 1 | 571 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_175570.1 | 0 | 1 | 529 | 1 | 556 | mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Arabidopsis thaliana] |
RefSeq | NP_566675.1 | 0 | 1 | 529 | 1 | 568 | mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Arabidopsis thaliana] |
RefSeq | XP_002310939.1 | 0 | 1 | 489 | 1 | 524 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nxc_A | 0 | 75 | 514 | 9 | 478 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 1fmi_A | 0 | 79 | 502 | 1 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo3_A | 0 | 82 | 502 | 4 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo2_A | 0 | 82 | 502 | 4 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
PDB | 1x9d_A | 0 | 81 | 502 | 81 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO780776 | 503 | 20 | 469 | 0 |
CU615093 | 325 | 212 | 534 | 0 |
DY974119 | 294 | 146 | 438 | 0 |
GW895275 | 284 | 208 | 489 | 0 |
HO780776 | 76 | 460 | 533 | 1e-18 |
Sequence Alignments (This image is cropped. Click for full image.) |
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