Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G003500.6 |
Family | GH47 |
Protein Properties | Length: 472 Molecular Weight: 52910.8 Isoelectric Point: 5.0201 |
Chromosome | Chromosome/Scaffold: 11 Start: 288128 End: 296648 |
Description | alpha-mannosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 10 | 440 | 0 |
AMIHAWSAYEKYAWGNDELLPQTQSGENSFGGLGATIIDSLDTLLIMGLDEQFQKAREWVANTLDFNKTYDASVFETTIRVVGGLLSTYDLSGDNIFLEK ARDIADRLLPAWDTPSGIPYNIIDLAHGNAHNPGWTGGDSILADSGTEQLEFIALSQRTGDPKYQEKVEKAIVALNKTFPADGLVPIYVNPNDGTAYGTI TFGAMGDSFYEYLLKAWIQGNKTSSVKPYRDMWETSMKGLVSLIRRSSPSSFAYICEKTRETLTDKMDELACFAPGMLALGSSGYGKVEAKKILSLAEEL AWTCYNFYQSTHTKLSGENYLFNPGRDMSVGTTWNILRPETVESLFYLWRLTGNVTYQEWGWNIFQAFEKNCRIESGYVGLTDVNLALKDNKMQTFFLAE TLKYLYLLFSPPTVIPLDEWVFNTEAHPLRI |
Full Sequence |
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Protein Sequence Length: 472 Download |
MQRREKVKEA MIHAWSAYEK YAWGNDELLP QTQSGENSFG GLGATIIDSL DTLLIMGLDE 60 QFQKAREWVA NTLDFNKTYD ASVFETTIRV VGGLLSTYDL SGDNIFLEKA RDIADRLLPA 120 WDTPSGIPYN IIDLAHGNAH NPGWTGGDSI LADSGTEQLE FIALSQRTGD PKYQEKVEKA 180 IVALNKTFPA DGLVPIYVNP NDGTAYGTIT FGAMGDSFYE YLLKAWIQGN KTSSVKPYRD 240 MWETSMKGLV SLIRRSSPSS FAYICEKTRE TLTDKMDELA CFAPGMLALG SSGYGKVEAK 300 KILSLAEELA WTCYNFYQST HTKLSGENYL FNPGRDMSVG TTWNILRPET VESLFYLWRL 360 TGNVTYQEWG WNIFQAFEKN CRIESGYVGL TDVNLALKDN KMQTFFLAET LKYLYLLFSP 420 PTVIPLDEWV FNTEAHPLRI VNRNDNIAGS ERQHKPTVGL QGRKTGRFGG N* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1331 | COG1331 | 0.006 | 89 | 184 | 97 | + Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] | ||
TIGR03897 | lanti_2_LanM | 0.002 | 90 | 181 | 101 | + type 2 lantibiotic biosynthesis protein LanM. Members of this family are known generally as LanM, a multifunctional enzyme of lantibiotic biosynthesis. This catalysis by LanM distinguishes the type 2 lantibiotics, such as mersacidin, cinnamycin, and lichenicidin, from LanBC-produced type 1 lantibiotics such as nisin and subtilin. The N-terminal domain contains regions associated with Ser and Thr dehydration. The C-terminal region contains a pfam05147 domain, which catalyzes the formation of the lanthionine bridge [Cellular processes, Toxin production and resistance]. | ||
pfam01532 | Glyco_hydro_47 | 0 | 10 | 440 | 451 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
PTZ00470 | PTZ00470 | 0 | 3 | 444 | 454 | + glycoside hydrolase family 47 protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI18472.1 | 0 | 1 | 467 | 101 | 571 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_175570.1 | 0 | 2 | 467 | 96 | 556 | mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Arabidopsis thaliana] |
RefSeq | XP_002325257.1 | 0 | 1 | 471 | 98 | 572 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519409.1 | 0 | 1 | 469 | 88 | 556 | mannosyl-oligosaccharide alpha-1,2-mannosidase, putative [Ricinus communis] |
RefSeq | XP_002528166.1 | 0 | 1 | 471 | 53 | 525 | mannosyl-oligosaccharide alpha-1,2-mannosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nxc_A | 0 | 2 | 452 | 19 | 478 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 1fmi_A | 0 | 3 | 440 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo3_A | 0 | 3 | 440 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo2_A | 0 | 3 | 440 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
PDB | 1x9d_A | 0 | 3 | 440 | 88 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CU615093 | 325 | 150 | 472 | 0 |
HO780776 | 430 | 2 | 407 | 0 |
DY974119 | 307 | 71 | 376 | 0 |
GO877285 | 307 | 58 | 363 | 0 |
HO780776 | 76 | 398 | 471 | 5e-19 |
Sequence Alignments (This image is cropped. Click for full image.) |
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