Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G021800.1 |
Family | GH35 |
Protein Properties | Length: 839 Molecular Weight: 94071.8 Isoelectric Point: 5.4717 |
Chromosome | Chromosome/Scaffold: 11 Start: 1530459 End: 1535929 |
Description | beta-galactosidase 8 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 37 | 339 | 0 |
LVIDGKRRVLQSGSIHYPRSTPEVWPELIWKSKEGGLDVIETYVFWNYHEPVRGEYYFEGRFDLVKFVRTVQEAGLMVHLRIGPYACAEWNFGGFPLWLH FIPGIQFRTTNDLFKKEMLRFLAKIVGLMKEEKLFASQGGPIILAQVENEYELVEWAYGVAGELYVNWAAEAAISLNTTVPWVMCRQEDAPDPIINTCNG FYCDQFTPNSPSKPKMWTENYSGWFKSFGYPIPHRPVEDLAFAVARFFEMGGTFHNYYMYFGGTNFGRTAGGPLVATSYDYDAPIDEYGFIRQPKWGHLR DLH |
Full Sequence |
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Protein Sequence Length: 839 Download |
MDMKTPLSLA LVFVSVFAVY CFDHALSTTV TYDHRALVID GKRRVLQSGS IHYPRSTPEV 60 WPELIWKSKE GGLDVIETYV FWNYHEPVRG EYYFEGRFDL VKFVRTVQEA GLMVHLRIGP 120 YACAEWNFGG FPLWLHFIPG IQFRTTNDLF KKEMLRFLAK IVGLMKEEKL FASQGGPIIL 180 AQVENEYELV EWAYGVAGEL YVNWAAEAAI SLNTTVPWVM CRQEDAPDPI INTCNGFYCD 240 QFTPNSPSKP KMWTENYSGW FKSFGYPIPH RPVEDLAFAV ARFFEMGGTF HNYYMYFGGT 300 NFGRTAGGPL VATSYDYDAP IDEYGFIRQP KWGHLRDLHL AIKHCEEYLI RSDPTHQQLG 360 HNLEAHIYYK SSNKCAAFLA NYDSELDANV TFNGNLYFLP AWSVSILPDC KNVIFNTAKV 420 VSQRILAHTT TANKLILSAT SWSWYVEKPG VWGNNSFTES RLLEQINTTK DTSDYLWYTT 480 SINIMPGQSK EVFLLIESLG HAALIFVNKK LVAFGYGNHD DASFSINEKI SLVEGNNTLD 540 IMSMMVGLQN FGPWFDVQGA GIFSVVLIDP WNNKYDVSAE EWTYQVGLEG EYLGLDKVIH 600 ANSSVWIKGS VPPINKTLIW YKVSFLTPQG NGPLALNLTS MGKGQAWVNG QSIGRYWPAY 660 LSPSEGCTEN CDYRGEYDST KCQKNCGQPA QTLYHVPRSW VHPGQNLLVL HEELGGDPTK 720 ISVLTRTGQE ICSFVSEDDP QPADFWILNM GFGSRSPEAR LTCEQGWHIT SINFASFGSP 780 QGNCGAFSVG TCHANILPMV QKACIGEEQC SVPVSTANLG DPCPGVLKTL AIEAMCSD* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.0008 | 58 | 135 | 84 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 1.0e-19 | 761 | 836 | 81 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 3.0e-21 | 30 | 332 | 365 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 2.0e-150 | 36 | 342 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 9 | 837 | 841 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK24373.1 | 0 | 1 | 837 | 1 | 861 | unknown [Picea sitchensis] |
EMBL | CBI16297.1 | 0 | 7 | 837 | 4 | 846 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002317239.1 | 0 | 28 | 838 | 34 | 849 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002521428.1 | 0 | 1 | 838 | 1 | 841 | beta-galactosidase, putative [Ricinus communis] |
RefSeq | XP_002530296.1 | 0 | 11 | 837 | 6 | 842 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 8.00001e-41 | 29 | 338 | 7 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 3e-35 | 39 | 348 | 12 | 333 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_A | 3e-35 | 39 | 348 | 12 | 333 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |