Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G044700.1 |
Family | GH17 |
Protein Properties | Length: 438 Molecular Weight: 48270.1 Isoelectric Point: 9.0693 |
Chromosome | Chromosome/Scaffold: 11 Start: 3336898 End: 3339390 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 66 | 382 | 0 |
LGINYGQVGSNLPPPDKVLDLLSSLKITKAKIYDTNPQILTTFANSNVELIVTVENQMLAVVMDPQQALQWVTTHIKPYFPATKITEISVGNEVFTDDDT SLIGYLVPAMVSIHGALVQLGLDKYIHVSTPNSLAILQESYPPSAGSFKSQVSATMSQYLQFLANTGSPFWINAYPYFAYKGAPNNVSLDYVLLNKNPGM VDPYTKLHYDNMLYAQVDAVVYAMFRLGYSGIEVRVSETGWPSKGDPDETGATPANAAVYNRNLLRRQMRNEGTPLRPNTKLEVYLFALFNEDMKPGPTS ERNYGLFQPDGTIAYNV |
Full Sequence |
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Protein Sequence Length: 438 Download |
GSNKKNKQTK NQTRKPETSA KLQKNKSHSS HSSIVTLSTR IFMMIHVFLL LSLCFSDYGF 60 LPVASLGINY GQVGSNLPPP DKVLDLLSSL KITKAKIYDT NPQILTTFAN SNVELIVTVE 120 NQMLAVVMDP QQALQWVTTH IKPYFPATKI TEISVGNEVF TDDDTSLIGY LVPAMVSIHG 180 ALVQLGLDKY IHVSTPNSLA ILQESYPPSA GSFKSQVSAT MSQYLQFLAN TGSPFWINAY 240 PYFAYKGAPN NVSLDYVLLN KNPGMVDPYT KLHYDNMLYA QVDAVVYAMF RLGYSGIEVR 300 VSETGWPSKG DPDETGATPA NAAVYNRNLL RRQMRNEGTP LRPNTKLEVY LFALFNEDMK 360 PGPTSERNYG LFQPDGTIAY NVGLSALSTT SSTSSSSSSA SIFLTSSADK AAKTGYQSLV 420 YWMFVYLLAF QVLLRQH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0002 | 295 | 361 | 68 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 3.0e-93 | 66 | 382 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM96962.1 | 0 | 47 | 436 | 15 | 406 | putative beta-1,3-glucanase precursor [Arabidopsis thaliana] |
RefSeq | NP_174300.2 | 0 | 47 | 436 | 15 | 406 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002270153.1 | 0 | 36 | 383 | 4 | 351 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002332000.1 | 0 | 37 | 410 | 4 | 373 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519678.1 | 0 | 44 | 383 | 1 | 340 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 66 | 382 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 66 | 385 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 66 | 385 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 66 | 385 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 66 | 385 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |