Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G055100.1 |
Family | CE8 |
Protein Properties | Length: 580 Molecular Weight: 64371.2 Isoelectric Point: 9.6109 |
Chromosome | Chromosome/Scaffold: 11 Start: 4328938 End: 4330875 |
Description | pectin methylesterase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 268 | 564 | 0 |
NVVVVADGSGDYKTVSEAVAKAPVNSRKRYIIRIKAGVYRENVEIPSNKTNIMFIGDGRSRTVITGKRNVVDGSTTFRSATVAVAGEGFLARDITFENTA GPSKHQAVALRVSADLTAFYQCNMIAYQDTLYVHSQRQFFVNCLITGTVDFIFGNAAAVFQNCDIRARRPHRGQKNMVTAQGRTDRNQNTGIVFQKCRIG ATSDLQSVKNKFPTYLGRPWKEYSRTVILQSDISDVIHPAGWHDWNGSFALKTLFYGEYQNTGASAGTHARVKWDGHKVITNESEAQSYTAGEFISG |
Full Sequence |
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Protein Sequence Length: 580 Download |
MNESKEILTK NFDSAKHISS TKRHKKIFLA VLACLVIVAA LIGIVAKENS RNKFDETNES 60 HHAIVKSACS STFYPDLCFS AVAAAAAKKV TRKKDVIRLS LNITASAVEH NFYKIKKLLA 120 RKGLTERGVT ALHDCLETIN ETLDELHQAV EDLHGYPYKK PLTQHADDLK TLISAAMTNQ 180 ETCLDGFSHK NADKEVRKAL IDGEKYVEKM CSNALAMIKN MTDEDIANEM LIKRSNRKLE 240 EEGNGIGWPR WLSTGDRRRL RSSSVIPNVV VVADGSGDYK TVSEAVAKAP VNSRKRYIIR 300 IKAGVYRENV EIPSNKTNIM FIGDGRSRTV ITGKRNVVDG STTFRSATVA VAGEGFLARD 360 ITFENTAGPS KHQAVALRVS ADLTAFYQCN MIAYQDTLYV HSQRQFFVNC LITGTVDFIF 420 GNAAAVFQNC DIRARRPHRG QKNMVTAQGR TDRNQNTGIV FQKCRIGATS DLQSVKNKFP 480 TYLGRPWKEY SRTVILQSDI SDVIHPAGWH DWNGSFALKT LFYGEYQNTG ASAGTHARVK 540 WDGHKVITNE SEAQSYTAGE FISGGSWLYS TGFPFSLDL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 4.0e-163 | 49 | 579 | 546 | + pectinesterase | ||
PLN02484 | PLN02484 | 3.0e-172 | 62 | 575 | 518 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 5.0e-180 | 131 | 576 | 448 | + pectinesterase/pectinesterase inhibitor | ||
PLN02313 | PLN02313 | 0 | 47 | 579 | 544 | + Pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 268 | 564 | 297 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAB57670.1 | 0 | 51 | 579 | 55 | 584 | pectinesterase [Citrus sinensis] |
EMBL | CAB95025.1 | 0 | 62 | 579 | 59 | 579 | pectin methylesterase [Nicotiana tabacum] |
Swiss-Prot | O04886 | 0 | 51 | 579 | 55 | 584 | PME1_CITSI RecName: Full=Pectinesterase 1; Short=PE 1; AltName: Full=Pectin methylesterase; Flags: Precursor |
Swiss-Prot | P83948 | 0 | 51 | 579 | 55 | 584 | PME3_CITSI RecName: Full=Pectinesterase 3; Short=PE 3; AltName: Full=Pectin methylesterase 3; Flags: Precursor |
RefSeq | XP_002265171.1 | 0 | 1 | 579 | 31 | 611 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 262 | 579 | 2 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 265 | 575 | 1 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 4e-25 | 271 | 533 | 7 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 4e-25 | 271 | 533 | 7 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 4e-25 | 271 | 533 | 7 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |