Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G065300.3 |
Family | GH35 |
Protein Properties | Length: 789 Molecular Weight: 87567.2 Isoelectric Point: 8.9767 |
Chromosome | Chromosome/Scaffold: 11 Start: 5528822 End: 5535151 |
Description | beta galactosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 41 | 343 | 0 |
TINGQRRILLSGSIHYPRSSPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPAPGKYYFQGNYDLVKFIKLVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKY IPGIVFRTNNGPFKAQMQRFTKKIVDMMKAERLYESQGGPIILSQIENEYGPMEYELGAPGKAYSYWSAKMALGLATGVPWVMCKQDDAPDPIINTCNGF YCDYFSPNKANKPKMWTEAWTGWYTEFGGAVPYRPAEDLAFSVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLKRQPKWGHLKD LHR |
Full Sequence |
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Protein Sequence Length: 789 Download |
MAMVLNSKLP VVLNALLVVL LAISGVCLVS GSVSYDHKAI TINGQRRILL SGSIHYPRSS 60 PEMWPDLIQK AKEGGLDVIQ TYVFWNGHEP APGKYYFQGN YDLVKFIKLV QQAGLYVHLR 120 IGPYVCAEWN FGGFPVWLKY IPGIVFRTNN GPFKAQMQRF TKKIVDMMKA ERLYESQGGP 180 IILSQIENEY GPMEYELGAP GKAYSYWSAK MALGLATGVP WVMCKQDDAP DPIINTCNGF 240 YCDYFSPNKA NKPKMWTEAW TGWYTEFGGA VPYRPAEDLA FSVARFIQKG GSFVNYYMYH 300 GGTNFGRTAG GPFIATSYDY DAPLDEYGLK RQPKWGHLKD LHRAIKLCEP ALVYGDPTVI 360 RLGNYQEAHV FKYKAGGCAA FLANYNPRDY ATVSFRNNHY NLPPWSISIL PDCKNTVYNT 420 ARIGAQIARK KMVPVPMHGG LSWQAYNEET ASVADSSFTM VGLLEQINTT RDATDYLWYT 480 TDVKIDPHEG FLRNGKSPVL TVLSAGHALH VFVNGQLSGS SYGSLEFPKL TFSQRVNLRA 540 GINKISLLSI AVGLPNVGPH FETWNAGVLG PVTLNGLNEG RRDLSWQKWS YKIGLKGEAL 600 NLLSLSGSSS VEWAQRSFVS QRQPLTWYKT TFNAPAGNSP LALDMGSMGK GQIWINGKSI 660 GRHWPAYKAS GNCGVCSYAG TFNEKKCGTN CGEASQRWYH VPRSWLNPTG NLLVVFEEWG 720 GDPNGITLVR RETDSVCADI YEWQPNLMNY LMKASGKGSV EATAKEAVML TTLMMLLIGF 780 VLDRTSAQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 1.0e-7 | 55 | 191 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 8.0e-24 | 33 | 335 | 364 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-161 | 39 | 345 | 323 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 24 | 757 | 735 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK96254.1 | 0 | 26 | 757 | 26 | 757 | unknown [Populus trichocarpa x Populus deltoides] |
GenBank | ABV32545.1 | 0 | 11 | 757 | 6 | 752 | beta-galactosidase protein 2 [Prunus persica] |
GenBank | ACP18875.1 | 0 | 36 | 757 | 24 | 746 | beta-galactosidase pBG(a) [Carica papaya] |
RefSeq | XP_002327432.1 | 0 | 26 | 757 | 19 | 750 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527409.1 | 0 | 14 | 757 | 13 | 756 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 26 | 341 | 1 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 9.99995e-41 | 32 | 415 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 9.99995e-41 | 32 | 415 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |