y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G065300.4 |
Family | GH35 |
Protein Properties | Length: 785 Molecular Weight: 87273.5 Isoelectric Point: 8.6306 |
Chromosome | Chromosome/Scaffold: 11 Start: 5528822 End: 5535151 |
Description | beta galactosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 1 | 281 | 0 |
MWPDLIQKAKEGGLDVIQTYVFWNGHEPAPGKYYFQGNYDLVKFIKLVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKYIPGIVFRTNNGPFKAQMQRFTK KIVDMMKAERLYESQGGPIILSQIENEYGPMEYELGAPGKAYSYWSAKMALGLATGVPWVMCKQDDAPDPIINTCNGFYCDYFSPNKANKPKMWTEAWTG WYTEFGGAVPYRPAEDLAFSVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLKRQPKWGHLKDLHR |
Full Sequence |
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Protein Sequence Length: 785 Download |
MWPDLIQKAK EGGLDVIQTY VFWNGHEPAP GKYYFQGNYD LVKFIKLVQQ AGLYVHLRIG 60 PYVCAEWNFG GFPVWLKYIP GIVFRTNNGP FKAQMQRFTK KIVDMMKAER LYESQGGPII 120 LSQIENEYGP MEYELGAPGK AYSYWSAKMA LGLATGVPWV MCKQDDAPDP IINTCNGFYC 180 DYFSPNKANK PKMWTEAWTG WYTEFGGAVP YRPAEDLAFS VARFIQKGGS FVNYYMYHGG 240 TNFGRTAGGP FIATSYDYDA PLDEYGLKRQ PKWGHLKDLH RAIKLCEPAL VYGDPTVIRL 300 GNYQEAHVFK YKAGGCAAFL ANYNPRDYAT VSFRNNHYNL PPWSISILPD CKNTVYNTAR 360 IGAQIARKKM VPVPMHGGLS WQAYNEETAS VADSSFTMVG LLEQINTTRD ATDYLWYTTD 420 VKIDPHEGFL RNGKSPVLTV LSAGHALHVF VNGQLSGSSY GSLEFPKLTF SQRVNLRAGI 480 NKISLLSIAV GLPNVGPHFE TWNAGVLGPV TLNGLNEGRR DLSWQKWSYK IGLKGEALNL 540 LSLSGSSSVE WAQRSFVSQR QPLTWYKTTF NAPAGNSPLA LDMGSMGKGQ IWINGKSIGR 600 HWPAYKASGN CGVCSYAGTF NEKKCGTNCG EASQRWYHVP RSWLNPTGNL LVVFEEWGGD 660 PNGITLVRRE TDSVCADIYE WQPNLMNYLM KASGKVNKPL RPKVHLECDA GQKISAVKFA 720 SFGTPEGVCG SYREGSCHAH HSYDAFNRLC VGQNFCSVTV APEMFGGDPC PNVMKKLSVE 780 VICS* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 4.0e-7 | 2 | 129 | 143 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 2.0e-17 | 1 | 273 | 334 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 9.0e-21 | 706 | 783 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 6.0e-146 | 1 | 283 | 299 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 1 | 784 | 785 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK96254.1 | 0 | 1 | 784 | 63 | 846 | unknown [Populus trichocarpa x Populus deltoides] |
GenBank | ABV32545.1 | 0 | 1 | 784 | 58 | 841 | beta-galactosidase protein 2 [Prunus persica] |
EMBL | CAC44500.1 | 0 | 1 | 784 | 60 | 843 | beta-galactosidase [Fragaria x ananassa] |
RefSeq | XP_002327432.1 | 0 | 1 | 784 | 56 | 839 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527409.1 | 0 | 1 | 784 | 62 | 845 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 1e-39 | 2 | 279 | 39 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 1e-35 | 2 | 353 | 42 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 1e-35 | 2 | 353 | 42 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778160 | 671 | 1 | 669 | 0 |
HO780602 | 658 | 21 | 669 | 0 |
HO795552 | 526 | 61 | 585 | 0 |
HO795552 | 51 | 22 | 72 | 3e-21 |
HO795552 | 22 | 1 | 22 | 3e-21 |
Sequence Alignments (This image is cropped. Click for full image.) |
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