| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.011G065300.5 |
| Family | GH35 |
| Protein Properties | Length: 691 Molecular Weight: 76436.9 Isoelectric Point: 8.4749 |
| Chromosome | Chromosome/Scaffold: 11 Start: 5528822 End: 5535151 |
| Description | beta galactosidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 1 | 187 | 0 |
| MQRFTKKIVDMMKAERLYESQGGPIILSQIENEYGPMEYELGAPGKAYSYWSAKMALGLATGVPWVMCKQDDAPDPIINTCNGFYCDYFSPNKANKPKMW TEAWTGWYTEFGGAVPYRPAEDLAFSVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLKRQPKWGHLKDLHR | |||
| Full Sequence |
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| Protein Sequence Length: 691 Download |
| MQRFTKKIVD MMKAERLYES QGGPIILSQI ENEYGPMEYE LGAPGKAYSY WSAKMALGLA 60 TGVPWVMCKQ DDAPDPIINT CNGFYCDYFS PNKANKPKMW TEAWTGWYTE FGGAVPYRPA 120 EDLAFSVARF IQKGGSFVNY YMYHGGTNFG RTAGGPFIAT SYDYDAPLDE YGLKRQPKWG 180 HLKDLHRAIK LCEPALVYGD PTVIRLGNYQ EAHVFKYKAG GCAAFLANYN PRDYATVSFR 240 NNHYNLPPWS ISILPDCKNT VYNTARIGAQ IARKKMVPVP MHGGLSWQAY NEETASVADS 300 SFTMVGLLEQ INTTRDATDY LWYTTDVKID PHEGFLRNGK SPVLTVLSAG HALHVFVNGQ 360 LSGSSYGSLE FPKLTFSQRV NLRAGINKIS LLSIAVGLPN VGPHFETWNA GVLGPVTLNG 420 LNEGRRDLSW QKWSYKIGLK GEALNLLSLS GSSSVEWAQR SFVSQRQPLT WYKTTFNAPA 480 GNSPLALDMG SMGKGQIWIN GKSIGRHWPA YKASGNCGVC SYAGTFNEKK CGTNCGEASQ 540 RWYHVPRSWL NPTGNLLVVF EEWGGDPNGI TLVRRETDSV CADIYEWQPN LMNYLMKASG 600 KVNKPLRPKV HLECDAGQKI SAVKFASFGT PEGVCGSYRE GSCHAHHSYD AFNRLCVGQN 660 FCSVTVAPEM FGGDPCPNVM KKLSVEVICS * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02140 | Gal_Lectin | 1.0e-20 | 612 | 689 | 82 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 6.0e-78 | 1 | 189 | 205 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 1 | 690 | 691 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK96254.1 | 0 | 1 | 690 | 157 | 846 | unknown [Populus trichocarpa x Populus deltoides] |
| EMBL | CAC44500.1 | 0 | 1 | 690 | 154 | 843 | beta-galactosidase [Fragaria x ananassa] |
| RefSeq | XP_002327432.1 | 0 | 1 | 690 | 150 | 839 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329051.1 | 0 | 1 | 690 | 141 | 830 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527409.1 | 0 | 1 | 690 | 156 | 845 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0.00000000000001 | 20 | 185 | 149 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 0.000000004 | 22 | 172 | 145 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 0.000000004 | 22 | 172 | 145 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO780602 | 584 | 1 | 575 | 0 |
| HO778160 | 577 | 1 | 575 | 0 |
| HO795552 | 492 | 1 | 491 | 0 |
| HO784793 | 321 | 13 | 333 | 0 |
| CO115432 | 280 | 237 | 516 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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