Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G110800.1 |
Family | GH5 |
Protein Properties | Length: 533 Molecular Weight: 60154.4 Isoelectric Point: 5.4118 |
Chromosome | Chromosome/Scaffold: 11 Start: 13299475 End: 13302222 |
Description | |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 216 | 520 | 4.2039e-44 |
EVLERHRSTFIDAGDFEFLHRNGINTVRIPVGWWIAYDPNPPAPFIGGTLKALDNAFSWAHAYKIKCIIDLHAAPGSQNGMEHSASRDGTVGWTTSESVS QSLHVIDFLASRYANHPALLGIELLNEPSAASVPLDVLVPYYKHGYEIVRKHSPSAYVIVCQRIGNANPIELYQADIGSHNLVVDLHYYNLFDPFFVNLS PIENIRFIYESRESQIHALNDAKGPLVFIGEWVNEWNVTNGTQAEYQDFGRTQLEVYDAASFGWSYWTLKNDREHWDFEWNIKNNYLQLSNSRKNDIFNR LIWLL |
Full Sequence |
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Protein Sequence Length: 533 Download |
MELVISKWVF AFSLFSWLIF SVAYSVEGLD EDSKVRGVNL GGWLVLEGWI KPSLFEGIPN 60 PDMLDGTQVT FKSVKLQKYV CAENGGGSDI SVNRDAASSW ETFTLWRVSE SEFQFRTVQG 120 QFLSCYGNGC VVSATAKSAS STETFQIERN NDDRVHIKTK SGAYLQATID NQLVADYPGN 180 PGWDDNASTF DMSIVANNLH GDYQLGNGYG HNKAKEVLER HRSTFIDAGD FEFLHRNGIN 240 TVRIPVGWWI AYDPNPPAPF IGGTLKALDN AFSWAHAYKI KCIIDLHAAP GSQNGMEHSA 300 SRDGTVGWTT SESVSQSLHV IDFLASRYAN HPALLGIELL NEPSAASVPL DVLVPYYKHG 360 YEIVRKHSPS AYVIVCQRIG NANPIELYQA DIGSHNLVVD LHYYNLFDPF FVNLSPIENI 420 RFIYESRESQ IHALNDAKGP LVFIGEWVNE WNVTNGTQAE YQDFGRTQLE VYDAASFGWS 480 YWTLKNDREH WDFEWNIKNN YLQLSNSRKN DIFNRLIWLL VALVWFHRCR IL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00257 | Fascin | 0.0008 | 115 | 214 | 106 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
cd00257 | Fascin | 4.0e-9 | 67 | 176 | 110 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
pfam00150 | Cellulase | 2.0e-14 | 225 | 487 | 268 | + Cellulase (glycosyl hydrolase family 5). | ||
COG2730 | BglC | 1.0e-23 | 198 | 509 | 350 | + Endoglucanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0030674 | protein binding, bridging |
GO:0051015 | actin filament binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI33153.1 | 0 | 1 | 527 | 60 | 589 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002262875.1 | 0 | 1 | 527 | 48 | 575 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310872.1 | 0 | 35 | 504 | 1 | 473 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002438060.1 | 0 | 11 | 525 | 8 | 530 | hypothetical protein SORBIDRAFT_10g007500 [Sorghum bicolor] |
RefSeq | XP_002533566.1 | 0 | 26 | 526 | 8 | 510 | conserved hypothetical protein [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1eqp_A | 7e-26 | 202 | 407 | 45 | 252 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
PDB | 1eqp_A | 0.007 | 31 | 69 | 5 | 43 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
PDB | 3n9k_A | 1e-25 | 202 | 407 | 50 | 257 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
PDB | 3n9k_A | 0.007 | 31 | 69 | 10 | 48 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
PDB | 1eqc_A | 1e-25 | 202 | 407 | 45 | 252 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |