| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.011G110800.2 |
| Family | GH5 |
| Protein Properties | Length: 471 Molecular Weight: 53182.4 Isoelectric Point: 5.9285 |
| Chromosome | Chromosome/Scaffold: 11 Start: 13299398 End: 13302222 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH5 | 149 | 458 | 2.94273e-44 |
| HNKAKEVLERHRSTFIDAGDFEFLHRNGINTVRIPVGWWIAYDPNPPAPFIGGTLKALDNAFSWAHAYKIKCIIDLHAAPGSQNGMEHSASRDGTVGWTT SESVSQSLHVIDFLASRYANHPALLGIELLNEPSAASVPLDVLVPYYKHGYEIVRKHSPSAYVIVCQRIGNANPIELYQADIGSHNLVVDLHYYNLFDPF FVNLSPIENIRFIYESRESQIHALNDAKGPLVFIGEWVNEWNVTNGTQAEYQDFGRTQLEVYDAASFGWSYWTLKNDREHWDFEWNIKNNYLQLSNSRKN DIFNRLIWLL | |||
| Full Sequence |
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| Protein Sequence Length: 471 Download |
| MLDGTQVTFK SVKLQKYVCA ENGGGSDISV NRDAASSWET FTLWRVSESE FQFRTVQGQF 60 LSCYGNGCVV SATAKSASST ETFQIERNND DRVHIKTKSG AYLQATIDNQ LVADYPGNPG 120 WDDNASTFDM SIVANNLHGD YQLGNGYGHN KAKEVLERHR STFIDAGDFE FLHRNGINTV 180 RIPVGWWIAY DPNPPAPFIG GTLKALDNAF SWAHAYKIKC IIDLHAAPGS QNGMEHSASR 240 DGTVGWTTSE SVSQSLHVID FLASRYANHP ALLGIELLNE PSAASVPLDV LVPYYKHGYE 300 IVRKHSPSAY VIVCQRIGNA NPIELYQADI GSHNLVVDLH YYNLFDPFFV NLSPIENIRF 360 IYESRESQIH ALNDAKGPLV FIGEWVNEWN VTNGTQAEYQ DFGRTQLEVY DAASFGWSYW 420 TLKNDREHWD FEWNIKNNYL QLSNSRKNDI FNRLIWLLVA LVWFHRCRIL * 480 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00257 | Fascin | 0.0008 | 53 | 152 | 106 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| cd00257 | Fascin | 3.0e-9 | 5 | 114 | 110 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 2.0e-14 | 163 | 425 | 268 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 6.0e-24 | 136 | 447 | 350 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030674 | protein binding, bridging |
| GO:0051015 | actin filament binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI33153.1 | 0 | 1 | 465 | 120 | 589 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002262875.1 | 0 | 1 | 465 | 108 | 575 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310872.1 | 0 | 1 | 442 | 29 | 473 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002438060.1 | 0 | 1 | 463 | 71 | 530 | hypothetical protein SORBIDRAFT_10g007500 [Sorghum bicolor] |
| RefSeq | XP_002533566.1 | 0 | 1 | 464 | 45 | 510 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1eqp_A | 3e-26 | 140 | 345 | 45 | 252 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 3n9k_A | 4e-26 | 140 | 345 | 50 | 257 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
| PDB | 1eqc_A | 5e-26 | 140 | 345 | 45 | 252 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
| PDB | 1cz1_A | 5e-26 | 140 | 345 | 45 | 252 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
| PDB | 2pc8_A | 6e-26 | 140 | 345 | 51 | 258 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| CO087274 | 296 | 67 | 361 | 0 |
| JG854517 | 250 | 152 | 400 | 0 |
| CO114350 | 238 | 98 | 334 | 0 |
| EY770527 | 249 | 26 | 274 | 0 |
| EX167089 | 259 | 166 | 423 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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