Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G152600.1 |
Family | GT47 |
Protein Properties | Length: 483 Molecular Weight: 56130.5 Isoelectric Point: 9.7646 |
Chromosome | Chromosome/Scaffold: 11 Start: 26002357 End: 26004288 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 82 | 414 | 0 |
CLGRYIYIHDLPMRFNQDLLTNCQVLTRSIDKTSMCEYVQNSGFGPRIISSEASGLWNSNWFWTNQFMLEVIFHDRMKKYKCLTNDSLVASAIFVPYYAG LDLRRYLWGFNTSMRDSSGFDLINWLKQKPQWKTMWGKDHFLVSSRIARDFRRKSDRKSDWGSNFRFLPESKNLSMLTIESGPWENDIAVPYPTSFHPSS DDQVLQWQNLMRTQNRPYLFSFAGASRNRQKNSTRKEIIRHCQSSNKLCKLLDCNSVGHECDDPLKLMNLFRSSIFCLQPPGDSLTRRSTFDSILAGCIP VFFHPGSAYTQYLWYLPKNYSNYSVFISATDLK |
Full Sequence |
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Protein Sequence Length: 483 Download |
MKFHALISEF CVAKPLKNKW RNQSRRINCS KYLCFLLMFS IVLLIFLRHL FFFSIDARPS 60 SHHHSKKKIH SLVGESSSQD SCLGRYIYIH DLPMRFNQDL LTNCQVLTRS IDKTSMCEYV 120 QNSGFGPRII SSEASGLWNS NWFWTNQFML EVIFHDRMKK YKCLTNDSLV ASAIFVPYYA 180 GLDLRRYLWG FNTSMRDSSG FDLINWLKQK PQWKTMWGKD HFLVSSRIAR DFRRKSDRKS 240 DWGSNFRFLP ESKNLSMLTI ESGPWENDIA VPYPTSFHPS SDDQVLQWQN LMRTQNRPYL 300 FSFAGASRNR QKNSTRKEII RHCQSSNKLC KLLDCNSVGH ECDDPLKLMN LFRSSIFCLQ 360 PPGDSLTRRS TFDSILAGCI PVFFHPGSAY TQYLWYLPKN YSNYSVFISA TDLKLGKVRI 420 EEKLVTVSKD EVASMREEVI RLIPRIIYGD RRSGVESVED DAFDLAIKGV LKRVDRLRGS 480 DL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-54 | 81 | 424 | 360 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_193135.2 | 0 | 33 | 478 | 41 | 488 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002280815.1 | 0 | 74 | 478 | 85 | 484 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002321098.1 | 0 | 80 | 478 | 48 | 442 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518609.1 | 0 | 77 | 478 | 71 | 467 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
RefSeq | XP_002532518.1 | 0 | 73 | 477 | 93 | 497 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |