Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G155500.1 |
Family | GH35 |
Protein Properties | Length: 891 Molecular Weight: 99933.2 Isoelectric Point: 5.8221 |
Chromosome | Chromosome/Scaffold: 11 Start: 27081490 End: 27099640 |
Description | beta galactosidase 9 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 41 | 344 | 0 |
LIIDGKRRMLISGGIHYPRATPQMWPDLIAKSKEGGADVIESYTFWNGHEPVRGQYNFEGRFDLVKFVKLVGDNGLYFLLRIGPYVCAEWNFGGFPVWLR DIPGIEFRTDNEPFKREMQRFVTKIVDLMREEKLFSWQGGPIILLQIENEYGNMEGSYGQKGKEYVRWAANMALGLGAGVPWVMCKQTDAPGDIIDTCNN YYCDGYKPNSPNKPTIWTENWDGWYTSWGGRLPHRPVEDLAFAVARFFQRGGSLMNYYMYFGGTNFGRTSGGPFYITSYDYDAPIDEYGLRSEPKWGHLK DLHA |
Full Sequence |
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Protein Sequence Length: 891 Download |
MVVFENKAIP KLLLVCLFVQ FSVSAANFFQ PFNVTYDHRA LIIDGKRRML ISGGIHYPRA 60 TPQMWPDLIA KSKEGGADVI ESYTFWNGHE PVRGQYNFEG RFDLVKFVKL VGDNGLYFLL 120 RIGPYVCAEW NFGGFPVWLR DIPGIEFRTD NEPFKREMQR FVTKIVDLMR EEKLFSWQGG 180 PIILLQIENE YGNMEGSYGQ KGKEYVRWAA NMALGLGAGV PWVMCKQTDA PGDIIDTCNN 240 YYCDGYKPNS PNKPTIWTEN WDGWYTSWGG RLPHRPVEDL AFAVARFFQR GGSLMNYYMY 300 FGGTNFGRTS GGPFYITSYD YDAPIDEYGL RSEPKWGHLK DLHAAIKLCE RALVAADSPQ 360 YMKLGPRQEA HVYWENTQST VLNTTLSESQ SACSAFLANI DEHNTATVIF RGKSYSLPPW 420 SVSILPDCSN VAFNTAKVGA QTSVKLVENA LSPKISAPEL VMTKNEVSSI PESWMSVEEP 480 IGIWSESNFT VQGLLEHLKV TKDESDYLWH MTRIYVSDDD VAFWEENKVS PTLVIDSMRD 540 VLRIFINGEL IGSVSGHWVK VLQPVQFQQG YSDLMLLSQT VGLQNYGAFL EKDGAGFRGQ 600 IKLTGFKNGD IDLSKASWIY QVGLKGEFQK IFTIEENEKA GWTNLKLDDT PSTFTWYKAY 660 FDSHDGSEPI AIDLGSMGKG QAWVNGHHIG RYWNLTAPKD GCPDSCDYRG AYGSNKCMTN 720 CGKPTQTWYH VPRSWLQASN NLLVIFEEIG GNPFEISVKL RVPRILCAQM SESYYPPLRE 780 WLHLDLIDGK VSISDMKPQI HLQCEDGHII SSIEFASYGT PHGSCQNFSN GNCHSPNSLS 840 VISEACVGRN SCSVEVSNSG FGSDPCRGVL KTLAVEARCV STSTIGVSQF * 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 1.0e-5 | 56 | 192 | 153 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 2.0e-22 | 34 | 195 | 172 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 1.0e-27 | 802 | 879 | 81 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 2.0e-161 | 40 | 346 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 12 | 879 | 873 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD91079.1 | 0 | 11 | 886 | 12 | 891 | beta-D-galactosidase [Pyrus pyrifolia] |
DDBJ | BAE72075.1 | 0 | 11 | 890 | 12 | 894 | pear beta-galactosidase3 [Pyrus communis] |
RefSeq | XP_002263385.1 | 0 | 3 | 890 | 1 | 882 | PREDICTED: similar to pear beta-galactosidase3 [Vitis vinifera] |
RefSeq | XP_002328900.1 | 0 | 11 | 890 | 13 | 891 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518051.1 | 0 | 25 | 889 | 31 | 896 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 9.94922e-44 | 40 | 416 | 14 | 419 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.000001 | 532 | 775 | 399 | 598 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 9e-39 | 32 | 361 | 9 | 349 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 9e-39 | 32 | 361 | 9 | 349 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |