y
Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.011G155500.3 |
Family | GH35 |
Protein Properties | Length: 707 Molecular Weight: 79321.8 Isoelectric Point: 6.4564 |
Chromosome | Chromosome/Scaffold: 11 Start: 27081596 End: 27099640 |
Description | beta galactosidase 9 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH35 | 41 | 344 | 0 |
LIIDGKRRMLISGGIHYPRATPQMWPDLIAKSKEGGADVIESYTFWNGHEPVRGQYNFEGRFDLVKFVKLVGDNGLYFLLRIGPYVCAEWNFGGFPVWLR DIPGIEFRTDNEPFKREMQRFVTKIVDLMREEKLFSWQGGPIILLQIENEYGNMEGSYGQKGKEYVRWAANMALGLGAGVPWVMCKQTDAPGDIIDTCNN YYCDGYKPNSPNKPTIWTENWDGWYTSWGGRLPHRPVEDLAFAVARFFQRGGSLMNYYMYFGGTNFGRTSGGPFYITSYDYDAPIDEYGLRSEPKWGHLK DLHA |
Full Sequence |
---|
Protein Sequence Length: 707 Download |
MVVFENKAIP KLLLVCLFVQ FSVSAANFFQ PFNVTYDHRA LIIDGKRRML ISGGIHYPRA 60 TPQMWPDLIA KSKEGGADVI ESYTFWNGHE PVRGQYNFEG RFDLVKFVKL VGDNGLYFLL 120 RIGPYVCAEW NFGGFPVWLR DIPGIEFRTD NEPFKREMQR FVTKIVDLMR EEKLFSWQGG 180 PIILLQIENE YGNMEGSYGQ KGKEYVRWAA NMALGLGAGV PWVMCKQTDA PGDIIDTCNN 240 YYCDGYKPNS PNKPTIWTEN WDGWYTSWGG RLPHRPVEDL AFAVARFFQR GGSLMNYYMY 300 FGGTNFGRTS GGPFYITSYD YDAPIDEYGL RSEPKWGHLK DLHAAIKLCE RALVAADSPQ 360 YMKLGPRQEA HVYWENTQST VLNTTLSESQ SACSAFLANI DEHNTATVIF RGKSYSLPPW 420 SVSILPDCSN VAFNTAKVGL KGEFQKIFTI EENEKAGWTN LKLDDTPSTF TWYKAYFDSH 480 DGSEPIAIDL GSMGKGQAWV NGHHIGRYWN LTAPKDGCPD SCDYRGAYGS NKCMTNCGKP 540 TQTWYHVPRS WLQASNNLLV IFEEIGGNPF EISVKLRVPR ILCAQMSESY YPPLREWLHL 600 DLIDGKVSIS DMKPQIHLQC EDGHIISSIE FASYGTPHGS CQNFSNGNCH SPNSLSVISE 660 ACVGRNSCSV EVSNSGFGSD PCRGVLKTLA VEARCVSTST IGVSQF* 720 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1874 | LacA | 1.0e-22 | 34 | 195 | 172 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 5.0e-27 | 618 | 695 | 81 | + Galactose binding lectin domain. | ||
PLN03059 | PLN03059 | 2.0e-68 | 437 | 695 | 259 | + beta-galactosidase; Provisional | ||
pfam01301 | Glyco_hydro_35 | 1.0e-162 | 40 | 346 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 12 | 472 | 461 | + beta-galactosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD91079.1 | 0 | 11 | 447 | 12 | 449 | beta-D-galactosidase [Pyrus pyrifolia] |
DDBJ | BAD91079.1 | 0 | 435 | 702 | 624 | 891 | beta-D-galactosidase [Pyrus pyrifolia] |
DDBJ | BAE72075.1 | 0 | 11 | 447 | 12 | 449 | pear beta-galactosidase3 [Pyrus communis] |
DDBJ | BAE72075.1 | 0 | 435 | 706 | 623 | 894 | pear beta-galactosidase3 [Pyrus communis] |
RefSeq | XP_002328900.1 | 0 | 11 | 488 | 13 | 486 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 40 | 591 | 14 | 598 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 3e-39 | 32 | 361 | 9 | 349 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 3e-39 | 32 | 361 | 9 | 349 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |