| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.011G160300.2 |
| Family | GH116 |
| Protein Properties | Length: 912 Molecular Weight: 101496 Isoelectric Point: 6.8104 |
| Chromosome | Chromosome/Scaffold: 11 Start: 29340645 End: 29351057 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 493 | 855 | 0 |
| GRFLYLEGVEYIMWCTYDVHFYASFALLELFPKIELNIQRDFAKAVLSEDGRKVKFLAEGNYGIRKVRGAVPHDLGTHDPWNEMNAYNIHDTSKWKDLNS KFVLQVYRDFAATGDMAFGIEVWPAVRTAMEYMEQFDRDDDGLIENDGFPDQTYDAWTVHGVSAYCGCLWLAALQAAAAMAQRLGDKFFAETCKTKFFSA KSAFEKKLWNGSYFNYDSGSSSNSKSIQADQLAGQWYTSSSGLGPIFDEFKTRSSLQKIFDFNVMKVKGGRMGAVNGMHPNGKVDESCMQSREVWTGVTY AVAANMLLAGMEEEAFTTAEGIFIAGWSEEGFGYWFQTPEGWTTNGHYRSLIYMRPLAIWSMQ | |||
| Full Sequence |
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| Protein Sequence Length: 912 Download |
| MEAIQMVRLG IRLWSYVREE ASHGRKAPID PFTRESCKPS ASQGVPLGGM GSGSISRGFR 60 GEFRQWQIIP GTCNISPVMA NQFSIFISRD GGNKKYASVL APGQHEGLGK TSDEGISSWG 120 WNLNGQHSTY HALFPRAWTI YDGEPDPDLK VSCRQISPFV PHDYRDSSLP TAVFVYTLVN 180 TGKERAKVSL LFTWANSIGG ISHLSGDHVN EPFIGEDGVS GVLLHHKTAK GNPPVTFAVA 240 ASETQNVNVT VLPCFGLTEG SFITARKIWG KMMQDGQFDR ENFNIGPSMP SSPGETLCAA 300 VSASAWVEPH GKCTIAFALA WSSPKIKFSK GSSYHRRYTK FYGTSERAAV DLVHDALTNY 360 KHWEEEIEKW QSPILEDIRL PEWYKFTLFN ELYFLVAGGT VWIDSSSPSA DVKSDQDPPI 420 KVESKNIKVA EAEMNCRHST GFEHTSTSGC NSSTGVGLKQ NGSSTIPRKK RSCKHFSHHL 480 KTEDQLDGNE DVGRFLYLEG VEYIMWCTYD VHFYASFALL ELFPKIELNI QRDFAKAVLS 540 EDGRKVKFLA EGNYGIRKVR GAVPHDLGTH DPWNEMNAYN IHDTSKWKDL NSKFVLQVYR 600 DFAATGDMAF GIEVWPAVRT AMEYMEQFDR DDDGLIENDG FPDQTYDAWT VHGVSAYCGC 660 LWLAALQAAA AMAQRLGDKF FAETCKTKFF SAKSAFEKKL WNGSYFNYDS GSSSNSKSIQ 720 ADQLAGQWYT SSSGLGPIFD EFKTRSSLQK IFDFNVMKVK GGRMGAVNGM HPNGKVDESC 780 MQSREVWTGV TYAVAANMLL AGMEEEAFTT AEGIFIAGWS EEGFGYWFQT PEGWTTNGHY 840 RSLIYMRPLA IWSMQWVLSP PKAIIEAPKI NMMDRIVISP ATFSLSLPET RVRKIANKTA 900 CFGNSSLQCT C* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3408 | GDB1 | 0.0008 | 560 | 650 | 100 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 8.0e-30 | 44 | 404 | 367 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 2.0e-58 | 489 | 858 | 389 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 3.0e-67 | 44 | 363 | 330 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| pfam04685 | DUF608 | 6.0e-147 | 493 | 856 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB01359.1 | 0 | 2 | 911 | 60 | 937 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_189060.2 | 0 | 2 | 911 | 60 | 950 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | XP_002285674.1 | 0 | 2 | 911 | 60 | 978 | PREDICTED: similar to catalytic [Vitis vinifera] |
| RefSeq | XP_002303825.1 | 0 | 2 | 911 | 60 | 966 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518119.1 | 0 | 2 | 911 | 60 | 968 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO779860 | 279 | 635 | 912 | 0 |
| HO779860 | 150 | 487 | 636 | 0 |
| HO779860 | 105 | 358 | 462 | 0 |
| GT045437 | 318 | 59 | 376 | 0 |
| GT045437 | 29 | 371 | 399 | 0.0002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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