Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G160300.3 |
Family | GH116 |
Protein Properties | Length: 641 Molecular Weight: 71996.2 Isoelectric Point: 6.2097 |
Chromosome | Chromosome/Scaffold: 11 Start: 29340605 End: 29346996 |
Description | Beta-glucosidase, GBA2 type family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH116 | 222 | 584 | 0 |
GRFLYLEGVEYIMWCTYDVHFYASFALLELFPKIELNIQRDFAKAVLSEDGRKVKFLAEGNYGIRKVRGAVPHDLGTHDPWNEMNAYNIHDTSKWKDLNS KFVLQVYRDFAATGDMAFGIEVWPAVRTAMEYMEQFDRDDDGLIENDGFPDQTYDAWTVHGVSAYCGCLWLAALQAAAAMAQRLGDKFFAETCKTKFFSA KSAFEKKLWNGSYFNYDSGSSSNSKSIQADQLAGQWYTSSSGLGPIFDEFKTRSSLQKIFDFNVMKVKGGRMGAVNGMHPNGKVDESCMQSREVWTGVTY AVAANMLLAGMEEEAFTTAEGIFIAGWSEEGFGYWFQTPEGWTTNGHYRSLIYMRPLAIWSMQ |
Full Sequence |
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Protein Sequence Length: 641 Download |
MMQDGQFDRE NFNIGPSMPS SPGETLCAAV SASAWVEPHG KCTIAFALAW SSPKIKFSKG 60 SSYHRRYTKF YGTSERAAVD LVHDALTNYK HWEEEIEKWQ SPILEDIRLP EWYKFTLFNE 120 LYFLVAGGTV WIDSSSPSAD VKSDQDPPIK VESKNIKVAE AEMNCRHSTG FEHTSTSGCN 180 SSTGVGLKQN GSSTIPRKKR SCKHFSHHLK TEDQLDGNED VGRFLYLEGV EYIMWCTYDV 240 HFYASFALLE LFPKIELNIQ RDFAKAVLSE DGRKVKFLAE GNYGIRKVRG AVPHDLGTHD 300 PWNEMNAYNI HDTSKWKDLN SKFVLQVYRD FAATGDMAFG IEVWPAVRTA MEYMEQFDRD 360 DDGLIENDGF PDQTYDAWTV HGVSAYCGCL WLAALQAAAA MAQRLGDKFF AETCKTKFFS 420 AKSAFEKKLW NGSYFNYDSG SSSNSKSIQA DQLAGQWYTS SSGLGPIFDE FKTRSSLQKI 480 FDFNVMKVKG GRMGAVNGMH PNGKVDESCM QSREVWTGVT YAVAANMLLA GMEEEAFTTA 540 EGIFIAGWSE EGFGYWFQTP EGWTTNGHYR SLIYMRPLAI WSMQWVLSPP KAIIEAPKIN 600 MMDRIVISPA TFSLSLPETR VRKIANKTAC FGNSSLQCTC * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3408 | GDB1 | 0.0006 | 289 | 379 | 100 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
COG4354 | COG4354 | 2.0e-12 | 22 | 133 | 112 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
pfam12215 | GBA2_N | 3.0e-13 | 2 | 92 | 92 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
COG4354 | COG4354 | 8.0e-59 | 218 | 587 | 389 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
pfam04685 | DUF608 | 3.0e-148 | 222 | 585 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. |
Gene Ontology | |
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GO Term | Description |
GO:0004348 | glucosylceramidase activity |
GO:0006665 | sphingolipid metabolic process |
GO:0016021 | integral to membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN61187.1 | 0 | 1 | 640 | 216 | 900 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_189060.2 | 0 | 1 | 640 | 330 | 950 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
RefSeq | XP_002285674.1 | 0 | 1 | 640 | 330 | 978 | PREDICTED: similar to catalytic [Vitis vinifera] |
RefSeq | XP_002303825.1 | 0 | 1 | 640 | 321 | 966 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518119.1 | 0 | 1 | 640 | 330 | 968 | conserved hypothetical protein [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO779860 | 279 | 364 | 641 | 0 |
HO779860 | 150 | 216 | 365 | 0 |
HO779860 | 105 | 87 | 191 | 0 |
GT045992 | 338 | 288 | 625 | 0 |
GT051521 | 331 | 274 | 604 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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