| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.011G177100.1 |
| Family | AA3 |
| Protein Properties | Length: 747 Molecular Weight: 81786.7 Isoelectric Point: 7.941 |
| Chromosome | Chromosome/Scaffold: 11 Start: 41165100 End: 41170749 |
| Description | fatty alcohol oxidase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 226 | 745 | 0 |
| VSEDTQQNVYRIKCDAVVIGSGCGGGVAAAMLAGSGLKVVVVEKGNYFTSTDYSPFEGPSMDKLYESGGILPSLDGQLLILAGSTVGGGSAVNWSACIKT PKYVLKEWAEDCKIPLFGSNEYVSAMETVCERIGVTHDCKEEGFQNQVLRKGCENLGLKVEKVPRNSSESHYCGSCGFGCRRGDKKGTDRTWLVDAVNNN AVIITGCKAERFILERNKVGSARKMKCLGVIAKPSNQNITKELHIEAKVTISACGALLTPLLMHSSGLKNRNIGQNLHLHPVLMAWGYFPDSDSKFKGKA YEGGIITSVHKVAGNDNKVQAIIETPSLGPAQYSAVCPWVSGLDMKARMLKFSRTAHMITIIRDQGSGKVHAGGRVTYKFEEVDRQNLRAGLRQSLRILV AAGAVEVGTHRSDGQRKRCKGISNEELEEFLDSVSMLTSPLCTGENWVVHTSAHQMGSCRMGINEEEGAVDENGESWEAEGLFVCDASVLPSAVGVNPMI TVQSTAYCLSKKIAESLRQQ | |||
| Full Sequence |
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| Protein Sequence Length: 747 Download |
| MEGKCEEQPW LHGDKREPKY SHGFCSAEIQ TLASVAEVFF PSLPPDSGFQ GKETQPSKAV 60 QSFLKASASQ PAFPDEVAEL LGKRAFIESV IVVRIVLVLL WTRVGSLLLC GRQCLGKEWP 120 FINDFGSMGV EKREKVMQNW LKHGFLFTPT RVAFIYLKVF CLFVYFSRVG EDGYNPAWEA 180 IGYNVDKVED QPQARKERPL QKGMIETVHE KDSTLYRSLS QKGLLVSEDT QQNVYRIKCD 240 AVVIGSGCGG GVAAAMLAGS GLKVVVVEKG NYFTSTDYSP FEGPSMDKLY ESGGILPSLD 300 GQLLILAGST VGGGSAVNWS ACIKTPKYVL KEWAEDCKIP LFGSNEYVSA METVCERIGV 360 THDCKEEGFQ NQVLRKGCEN LGLKVEKVPR NSSESHYCGS CGFGCRRGDK KGTDRTWLVD 420 AVNNNAVIIT GCKAERFILE RNKVGSARKM KCLGVIAKPS NQNITKELHI EAKVTISACG 480 ALLTPLLMHS SGLKNRNIGQ NLHLHPVLMA WGYFPDSDSK FKGKAYEGGI ITSVHKVAGN 540 DNKVQAIIET PSLGPAQYSA VCPWVSGLDM KARMLKFSRT AHMITIIRDQ GSGKVHAGGR 600 VTYKFEEVDR QNLRAGLRQS LRILVAAGAV EVGTHRSDGQ RKRCKGISNE ELEEFLDSVS 660 MLTSPLCTGE NWVVHTSAHQ MGSCRMGINE EEGAVDENGE SWEAEGLFVC DASVLPSAVG 720 VNPMITVQST AYCLSKKIAE SLRQQK* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK06370 | PRK06370 | 2.0e-5 | 240 | 270 | 31 | + mercuric reductase; Validated | ||
| COG1233 | COG1233 | 2.0e-6 | 240 | 286 | 54 | + Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | ||
| pfam05199 | GMC_oxred_C | 1.0e-22 | 600 | 734 | 135 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 9.0e-37 | 238 | 743 | 572 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 1.0e-88 | 286 | 507 | 225 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0016491 | oxidoreductase activity |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN71289.1 | 0 | 1 | 745 | 1 | 738 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002285334.1 | 0 | 1 | 745 | 1 | 738 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311685.1 | 0 | 1 | 744 | 1 | 743 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002314488.1 | 0 | 29 | 742 | 1 | 713 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528823.1 | 0 | 8 | 746 | 6 | 746 | disulfide oxidoreductase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3t37_A | 0.0008 | 238 | 717 | 17 | 499 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 3ljp_B | 0.005 | 374 | 727 | 170 | 515 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 3ljp_A | 0.005 | 374 | 727 | 170 | 515 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO794753 | 745 | 2 | 745 | 0 |
| ES815664 | 349 | 339 | 687 | 0 |
| HO779224 | 447 | 209 | 655 | 0 |
| ES808761 | 355 | 357 | 710 | 0 |
| JG847425 | 236 | 101 | 336 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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