| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.011G177100.2 |
| Family | AA3 |
| Protein Properties | Length: 655 Molecular Weight: 71075.8 Isoelectric Point: 7.1289 |
| Chromosome | Chromosome/Scaffold: 11 Start: 41165216 End: 41170734 |
| Description | fatty alcohol oxidase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 134 | 653 | 0 |
| VSEDTQQNVYRIKCDAVVIGSGCGGGVAAAMLAGSGLKVVVVEKGNYFTSTDYSPFEGPSMDKLYESGGILPSLDGQLLILAGSTVGGGSAVNWSACIKT PKYVLKEWAEDCKIPLFGSNEYVSAMETVCERIGVTHDCKEEGFQNQVLRKGCENLGLKVEKVPRNSSESHYCGSCGFGCRRGDKKGTDRTWLVDAVNNN AVIITGCKAERFILERNKVGSARKMKCLGVIAKPSNQNITKELHIEAKVTISACGALLTPLLMHSSGLKNRNIGQNLHLHPVLMAWGYFPDSDSKFKGKA YEGGIITSVHKVAGNDNKVQAIIETPSLGPAQYSAVCPWVSGLDMKARMLKFSRTAHMITIIRDQGSGKVHAGGRVTYKFEEVDRQNLRAGLRQSLRILV AAGAVEVGTHRSDGQRKRCKGISNEELEEFLDSVSMLTSPLCTGENWVVHTSAHQMGSCRMGINEEEGAVDENGESWEAEGLFVCDASVLPSAVGVNPMI TVQSTAYCLSKKIAESLRQQ | |||
| Full Sequence |
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| Protein Sequence Length: 655 Download |
| MEGKCEEQPW LHGDKREPKY SHGFCSAEIQ TLASVAEVFF PSLPPDSGFQ GKETQPSKAV 60 QSFLKASASQ PAFPDEVGED GYNPAWEAIG YNVDKVEDQP QARKERPLQK GMIETVHEKD 120 STLYRSLSQK GLLVSEDTQQ NVYRIKCDAV VIGSGCGGGV AAAMLAGSGL KVVVVEKGNY 180 FTSTDYSPFE GPSMDKLYES GGILPSLDGQ LLILAGSTVG GGSAVNWSAC IKTPKYVLKE 240 WAEDCKIPLF GSNEYVSAME TVCERIGVTH DCKEEGFQNQ VLRKGCENLG LKVEKVPRNS 300 SESHYCGSCG FGCRRGDKKG TDRTWLVDAV NNNAVIITGC KAERFILERN KVGSARKMKC 360 LGVIAKPSNQ NITKELHIEA KVTISACGAL LTPLLMHSSG LKNRNIGQNL HLHPVLMAWG 420 YFPDSDSKFK GKAYEGGIIT SVHKVAGNDN KVQAIIETPS LGPAQYSAVC PWVSGLDMKA 480 RMLKFSRTAH MITIIRDQGS GKVHAGGRVT YKFEEVDRQN LRAGLRQSLR ILVAAGAVEV 540 GTHRSDGQRK RCKGISNEEL EEFLDSVSML TSPLCTGENW VVHTSAHQMG SCRMGINEEE 600 GAVDENGESW EAEGLFVCDA SVLPSAVGVN PMITVQSTAY CLSKKIAESL RQQK* 660 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK06370 | PRK06370 | 2.0e-5 | 148 | 178 | 31 | + mercuric reductase; Validated | ||
| COG1233 | COG1233 | 2.0e-6 | 148 | 194 | 54 | + Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | ||
| pfam05199 | GMC_oxred_C | 2.0e-22 | 508 | 642 | 135 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 5.0e-37 | 146 | 651 | 572 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 2.0e-89 | 194 | 415 | 225 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0016491 | oxidoreductase activity |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002311685.1 | 0.000000000009 | 1 | 79 | 1 | 79 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002311685.1 | 0 | 72 | 652 | 163 | 743 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002314488.1 | 0.000002 | 29 | 79 | 1 | 51 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002314488.1 | 0 | 73 | 650 | 136 | 713 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528823.1 | 0 | 73 | 654 | 161 | 746 | disulfide oxidoreductase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3t37_A | 0.0008 | 146 | 625 | 17 | 499 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 3ljp_B | 0.004 | 282 | 635 | 170 | 515 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 3ljp_A | 0.004 | 282 | 635 | 170 | 515 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 2jbv_B | 0.007 | 282 | 635 | 170 | 515 | A Chain A, Crystal Structure Of Choline Oxidase Reveals Insights Into The Catalytic Mechanism |
| PDB | 2jbv_A | 0.007 | 282 | 635 | 170 | 515 | A Chain A, Crystal Structure Of Choline Oxidase Reveals Insights Into The Catalytic Mechanism |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO794753 | 582 | 72 | 653 | 0 |
| ES815664 | 349 | 247 | 595 | 0 |
| HO779224 | 449 | 117 | 565 | 0 |
| ES808761 | 355 | 265 | 618 | 0 |
| CO497984 | 237 | 1 | 237 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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