| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.011G177100.3 |
| Family | AA3 |
| Protein Properties | Length: 678 Molecular Weight: 74298.5 Isoelectric Point: 8.2972 |
| Chromosome | Chromosome/Scaffold: 11 Start: 41166040 End: 41170734 |
| Description | fatty alcohol oxidase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 157 | 676 | 0 |
| VSEDTQQNVYRIKCDAVVIGSGCGGGVAAAMLAGSGLKVVVVEKGNYFTSTDYSPFEGPSMDKLYESGGILPSLDGQLLILAGSTVGGGSAVNWSACIKT PKYVLKEWAEDCKIPLFGSNEYVSAMETVCERIGVTHDCKEEGFQNQVLRKGCENLGLKVEKVPRNSSESHYCGSCGFGCRRGDKKGTDRTWLVDAVNNN AVIITGCKAERFILERNKVGSARKMKCLGVIAKPSNQNITKELHIEAKVTISACGALLTPLLMHSSGLKNRNIGQNLHLHPVLMAWGYFPDSDSKFKGKA YEGGIITSVHKVAGNDNKVQAIIETPSLGPAQYSAVCPWVSGLDMKARMLKFSRTAHMITIIRDQGSGKVHAGGRVTYKFEEVDRQNLRAGLRQSLRILV AAGAVEVGTHRSDGQRKRCKGISNEELEEFLDSVSMLTSPLCTGENWVVHTSAHQMGSCRMGINEEEGAVDENGESWEAEGLFVCDASVLPSAVGVNPMI TVQSTAYCLSKKIAESLRQQ | |||
| Full Sequence |
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| Protein Sequence Length: 678 Download |
| MFVSMLQVAE LLGKRAFIES VIVVRIVLVL LWTRVGSLLL CGRQCLGKEW PFINDFGSMG 60 VEKREKVMQN WLKHGFLFTP TRVAFIYLKV FCLFVYFSRV GEDGYNPAWE AIGYNVDKVE 120 DQPQARKERP LQKGMIETVH EKDSTLYRSL SQKGLLVSED TQQNVYRIKC DAVVIGSGCG 180 GGVAAAMLAG SGLKVVVVEK GNYFTSTDYS PFEGPSMDKL YESGGILPSL DGQLLILAGS 240 TVGGGSAVNW SACIKTPKYV LKEWAEDCKI PLFGSNEYVS AMETVCERIG VTHDCKEEGF 300 QNQVLRKGCE NLGLKVEKVP RNSSESHYCG SCGFGCRRGD KKGTDRTWLV DAVNNNAVII 360 TGCKAERFIL ERNKVGSARK MKCLGVIAKP SNQNITKELH IEAKVTISAC GALLTPLLMH 420 SSGLKNRNIG QNLHLHPVLM AWGYFPDSDS KFKGKAYEGG IITSVHKVAG NDNKVQAIIE 480 TPSLGPAQYS AVCPWVSGLD MKARMLKFSR TAHMITIIRD QGSGKVHAGG RVTYKFEEVD 540 RQNLRAGLRQ SLRILVAAGA VEVGTHRSDG QRKRCKGISN EELEEFLDSV SMLTSPLCTG 600 ENWVVHTSAH QMGSCRMGIN EEEGAVDENG ESWEAEGLFV CDASVLPSAV GVNPMITVQS 660 TAYCLSKKIA ESLRQQK* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK06370 | PRK06370 | 2.0e-5 | 171 | 201 | 31 | + mercuric reductase; Validated | ||
| COG1233 | COG1233 | 2.0e-6 | 171 | 217 | 54 | + Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | ||
| pfam05199 | GMC_oxred_C | 1.0e-22 | 531 | 665 | 135 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 8.0e-37 | 169 | 674 | 572 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 1.0e-88 | 217 | 438 | 225 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0016491 | oxidoreductase activity |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN71289.1 | 0 | 9 | 676 | 72 | 738 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002285334.1 | 0 | 9 | 676 | 72 | 738 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311685.1 | 0 | 7 | 675 | 76 | 743 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002314488.1 | 0 | 7 | 673 | 48 | 713 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528823.1 | 0 | 7 | 677 | 73 | 746 | disulfide oxidoreductase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3t37_A | 0.0009 | 169 | 648 | 17 | 499 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 3ljp_B | 0.005 | 247 | 658 | 121 | 515 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 3ljp_A | 0.005 | 247 | 658 | 121 | 515 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO794753 | 629 | 48 | 676 | 0 |
| ES815664 | 349 | 270 | 618 | 0 |
| HO779224 | 447 | 140 | 586 | 0 |
| ES808761 | 355 | 288 | 641 | 0 |
| JG847425 | 236 | 32 | 267 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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