y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G181000.1 |
Family | GH14 |
Protein Properties | Length: 588 Molecular Weight: 64536.3 Isoelectric Point: 6.6105 |
Chromosome | Chromosome/Scaffold: 11 Start: 42596976 End: 42600115 |
Description | beta-amylase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 123 | 543 | 0 |
YVMMPLDSVTNGNTVNRKKAMNASLHALKSAGVEGIMIDVWWGLVEREAPGAYNWGGYAELLEMAKKHGLKVQAVMSFHQCGGNVGDSCTIPLPKWVTGE IEKDPDLAYTDQWGRRNYEYLSLGCDTLPVLKGRTPVQCYADFMRAFRDNFKHLLGDTIVEIQVGMGPAGELRYPSYPEANGTWKFPGIGAFQCYDKYML SSLKAAAEAAGKPEWGSTGPTDAGHYNNWPEDTPFFKKEGGGWNTPYGEFFLTWYSQMLLEHGARILSSATSIFDGAGVKISVKVAGIHWHYGTRSHAPE LTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDHEQPQDALCAPEKLVKQVALATGAAQVPLAGENALPRYDEYAHEQILRASSLNVDGSAVDREM CAFTYLRMNPSLFHPDNWRRF |
Full Sequence |
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Protein Sequence Length: 588 Download |
MALNLAHQIG SLAGTQIAAE VTTGEQSSSA TADVSGFRKV PLANLRCNAP GEALSPPMLT 60 PPLTPRSAAN RSAMMSLSLR PDLSAVCQAF GTLSPLETAE ESSASVAWKE GGKKEEKKGV 120 PVYVMMPLDS VTNGNTVNRK KAMNASLHAL KSAGVEGIMI DVWWGLVERE APGAYNWGGY 180 AELLEMAKKH GLKVQAVMSF HQCGGNVGDS CTIPLPKWVT GEIEKDPDLA YTDQWGRRNY 240 EYLSLGCDTL PVLKGRTPVQ CYADFMRAFR DNFKHLLGDT IVEIQVGMGP AGELRYPSYP 300 EANGTWKFPG IGAFQCYDKY MLSSLKAAAE AAGKPEWGST GPTDAGHYNN WPEDTPFFKK 360 EGGGWNTPYG EFFLTWYSQM LLEHGARILS SATSIFDGAG VKISVKVAGI HWHYGTRSHA 420 PELTAGYYNT RFRDGYLPIA QMLARHGAIF NFTCIEMRDH EQPQDALCAP EKLVKQVALA 480 TGAAQVPLAG ENALPRYDEY AHEQILRASS LNVDGSAVDR EMCAFTYLRM NPSLFHPDNW 540 RRFVAFVKKM NEGKGARRCW EEVEREAEQF VHVTQPFIQE AAVALMH* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02161 | PLN02161 | 4.0e-141 | 120 | 551 | 442 | + beta-amylase | ||
pfam01373 | Glyco_hydro_14 | 5.0e-142 | 123 | 546 | 435 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
PLN00197 | PLN00197 | 0 | 1 | 587 | 587 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 0 | 120 | 558 | 439 | + beta-amylase | ||
PLN02801 | PLN02801 | 0 | 120 | 550 | 435 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY89374.1 | 0 | 1 | 587 | 1 | 576 | beta-amylase 1 [Nicotiana langsdorffii x Nicotiana sanderae] |
EMBL | CAN71375.1 | 0 | 3 | 587 | 1 | 570 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002285569.1 | 0 | 2 | 587 | 3 | 573 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311706.1 | 0 | 3 | 587 | 1 | 562 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518196.1 | 0 | 1 | 587 | 1 | 574 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1b1y_A | 0 | 120 | 551 | 6 | 436 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 1wdp_A | 0 | 120 | 551 | 12 | 442 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 1q6c_A | 0 | 120 | 551 | 12 | 442 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 120 | 551 | 12 | 442 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1uko_D | 0 | 120 | 551 | 12 | 442 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO779314 | 411 | 178 | 588 | 0 |
DT555349 | 320 | 207 | 526 | 0 |
HO798206 | 349 | 240 | 588 | 0 |
HO826564 | 406 | 176 | 581 | 0 |
DT559764 | 299 | 240 | 538 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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