y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G181000.2 |
Family | GH14 |
Protein Properties | Length: 485 Molecular Weight: 52932.2 Isoelectric Point: 6.1984 |
Chromosome | Chromosome/Scaffold: 11 Start: 42597054 End: 42600085 |
Description | beta-amylase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 123 | 362 | 0 |
YVMMPLDSVTNGNTVNRKKAMNASLHALKSAGVEGIMIDVWWGLVEREAPGAYNWGGYAELLEMAKKHGLKVQAVMSFHQCGGNVGDSCTIPLPKWVTGE IEKDPDLAYTDQWGRRNYEYLSLGCDTLPVLKGRTPVQCYADFMRAFRDNFKHLLGDTIVEIQVGMGPAGELRYPSYPEANGTWKFPGIGAFQCYDKYML SSLKAAAEAAGKPEWGSTGPTDAGHYNNWPEDTPFFKKED |
Full Sequence |
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Protein Sequence Length: 485 Download |
MALNLAHQIG SLAGTQIAAE VTTGEQSSSA TADVSGFRKV PLANLRCNAP GEALSPPMLT 60 PPLTPRSAAN RSAMMSLSLR PDLSAVCQAF GTLSPLETAE ESSASVAWKE GGKKEEKKGV 120 PVYVMMPLDS VTNGNTVNRK KAMNASLHAL KSAGVEGIMI DVWWGLVERE APGAYNWGGY 180 AELLEMAKKH GLKVQAVMSF HQCGGNVGDS CTIPLPKWVT GEIEKDPDLA YTDQWGRRNY 240 EYLSLGCDTL PVLKGRTPVQ CYADFMRAFR DNFKHLLGDT IVEIQVGMGP AGELRYPSYP 300 EANGTWKFPG IGAFQCYDKY MLSSLKAAAE AAGKPEWGST GPTDAGHYNN WPEDTPFFKK 360 EDALCAPEKL VKQVALATGA AQVPLAGENA LPRYDEYAHE QILRASSLNV DGSAVDREMC 420 AFTYLRMNPS LFHPDNWRRF VAFVKKMNEG KGARRCWEEV EREAEQFVHV TQPFIQEAAV 480 ALMH* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02803 | PLN02803 | 8.0e-23 | 361 | 455 | 95 | + beta-amylase | ||
PLN00197 | PLN00197 | 3.0e-69 | 361 | 484 | 124 | + beta-amylase; Provisional | ||
PLN02801 | PLN02801 | 2.0e-104 | 120 | 360 | 242 | + beta-amylase | ||
PLN02803 | PLN02803 | 3.0e-147 | 120 | 361 | 242 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 1 | 361 | 361 | + beta-amylase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN71375.1 | 0 | 3 | 361 | 1 | 346 | hypothetical protein [Vitis vinifera] |
EMBL | CAN71375.1 | 0 | 361 | 484 | 449 | 570 | hypothetical protein [Vitis vinifera] |
EMBL | CBI35772.1 | 0 | 2 | 479 | 76 | 500 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002285569.1 | 0 | 2 | 361 | 3 | 349 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002285569.1 | 0 | 361 | 484 | 452 | 573 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1b1y_A | 0 | 120 | 359 | 6 | 243 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 1b1y_A | 0.00000001 | 362 | 448 | 348 | 436 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xgi_A | 0 | 120 | 359 | 10 | 247 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xgi_A | 0.00000002 | 359 | 448 | 349 | 440 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xgb_A | 0 | 120 | 359 | 10 | 247 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT551305 | 296 | 16 | 311 | 0 |
ES816601 | 317 | 1 | 317 | 0 |
DT466074 | 242 | 120 | 361 | 0 |
CO093556 | 254 | 1 | 254 | 0 |
ES816601 | 64 | 283 | 345 | 0.000000001 |
Sequence Alignments (This image is cropped. Click for full image.) |
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