Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G181000.3 |
Family | GH14 |
Protein Properties | Length: 378 Molecular Weight: 42470.1 Isoelectric Point: 6.375 |
Chromosome | Chromosome/Scaffold: 11 Start: 42598353 End: 42600085 |
Description | beta-amylase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 2 | 333 | 0 |
GIPLPKWVTGEIEKDPDLAYTDQWGRRNYEYLSLGCDTLPVLKGRTPVQCYADFMRAFRDNFKHLLGDTIVEIQVGMGPAGELRYPSYPEANGTWKFPGI GAFQCYDKYMLSSLKAAAEAAGKPEWGSTGPTDAGHYNNWPEDTPFFKKEGGGWNTPYGEFFLTWYSQMLLEHGARILSSATSIFDGAGVKISVKVAGIH WHYGTRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDHEQPQDALCAPEKLVKQVALATGAAQVPLAGENALPRYDEYAHEQILRASSL NVDGSAVDREMCAFTYLRMNPSLFHPDNWRRF |
Full Sequence |
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Protein Sequence Length: 378 Download |
MGIPLPKWVT GEIEKDPDLA YTDQWGRRNY EYLSLGCDTL PVLKGRTPVQ CYADFMRAFR 60 DNFKHLLGDT IVEIQVGMGP AGELRYPSYP EANGTWKFPG IGAFQCYDKY MLSSLKAAAE 120 AAGKPEWGST GPTDAGHYNN WPEDTPFFKK EGGGWNTPYG EFFLTWYSQM LLEHGARILS 180 SATSIFDGAG VKISVKVAGI HWHYGTRSHA PELTAGYYNT RFRDGYLPIA QMLARHGAIF 240 NFTCIEMRDH EQPQDALCAP EKLVKQVALA TGAAQVPLAG ENALPRYDEY AHEQILRASS 300 LNVDGSAVDR EMCAFTYLRM NPSLFHPDNW RRFVAFVKKM NEGKGARRCW EEVEREAEQF 360 VHVTQPFIQE AAVALMH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 2.0e-102 | 3 | 341 | 345 | + beta-amylase | ||
PLN02161 | PLN02161 | 9.0e-113 | 2 | 341 | 346 | + beta-amylase | ||
PLN02801 | PLN02801 | 4.0e-139 | 3 | 340 | 342 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 3 | 377 | 375 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 0 | 3 | 348 | 346 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY89374.1 | 0 | 3 | 377 | 202 | 576 | beta-amylase 1 [Nicotiana langsdorffii x Nicotiana sanderae] |
EMBL | CAN71375.1 | 0 | 3 | 377 | 198 | 570 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311706.1 | 0 | 3 | 377 | 188 | 562 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002314522.1 | 0 | 3 | 375 | 100 | 472 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518196.1 | 0 | 3 | 377 | 200 | 574 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2dqx_A | 0 | 1 | 341 | 103 | 442 | A Chain A, Mutant Beta-Amylase (W55r) From Soy Bean |
PDB | 1q6d_A | 0 | 1 | 341 | 103 | 442 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
PDB | 1wdp_A | 0 | 1 | 341 | 103 | 442 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
PDB | 1q6c_A | 0 | 1 | 341 | 103 | 442 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 1 | 341 | 103 | 442 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO779314 | 376 | 3 | 378 | 0 |
DT555349 | 314 | 3 | 316 | 0 |
HO798206 | 349 | 30 | 378 | 0 |
DT559764 | 299 | 30 | 328 | 0 |
DY279190 | 349 | 29 | 377 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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