Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G185700.1 |
Family | GH14 |
Protein Properties | Length: 537 Molecular Weight: 58939.4 Isoelectric Point: 6.7281 |
Chromosome | Chromosome/Scaffold: 11 Start: 44204602 End: 44207725 |
Description | beta-amylase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 89 | 495 | 0 |
FVGLPLDAVSDGNSVNHARAIGAGLKALKLLGVEGVELPVWWGVVENEMGKYDWSGYLAVAEMVQKAGLKLHVSLCFHASSQPRIPLPKWVTKIGESQSS IFFADRSGQHYQQCLSLAVDDLAVLDGKTPVQVYQGFCESFKSTFSPFIGSTITGISMGLGPDGELRYPSHHKPAKSGTITGVGEFQCYDTNMLNLLKQY AEANGNPLWGLGGPHDAPTYDQAPNLNSFFKDHGGSWESPYGDFFLSWYSSELVSHGNRLLSLASSIFGDTEVNVYGKVPLMHSWYKTRAHPSELTAGFY NTASRNGYEAVAEMFARNSCKIILPGMDLSDEHQPHDSLSSPESLLAQIRTTCNKHRVEVAGQNLASGAPGGLEQIKKNMLGENPIDLFTYQRMGAHFFS PEHFPSF |
Full Sequence |
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Protein Sequence Length: 537 Download |
MEVSVIRSSS QAKISKTELG CRDLRFCFGK SNDKNKIFSR KPNSVCFDSQ ISRFRKAGLR 60 FTLKAVHSDP ILESKSPATS KSLDRLRLFV GLPLDAVSDG NSVNHARAIG AGLKALKLLG 120 VEGVELPVWW GVVENEMGKY DWSGYLAVAE MVQKAGLKLH VSLCFHASSQ PRIPLPKWVT 180 KIGESQSSIF FADRSGQHYQ QCLSLAVDDL AVLDGKTPVQ VYQGFCESFK STFSPFIGST 240 ITGISMGLGP DGELRYPSHH KPAKSGTITG VGEFQCYDTN MLNLLKQYAE ANGNPLWGLG 300 GPHDAPTYDQ APNLNSFFKD HGGSWESPYG DFFLSWYSSE LVSHGNRLLS LASSIFGDTE 360 VNVYGKVPLM HSWYKTRAHP SELTAGFYNT ASRNGYEAVA EMFARNSCKI ILPGMDLSDE 420 HQPHDSLSSP ESLLAQIRTT CNKHRVEVAG QNLASGAPGG LEQIKKNMLG ENPIDLFTYQ 480 RMGAHFFSPE HFPSFTEFVR SLSQPELHPD DLPSDEAEAT ESVQTSSDPN IHLQTA* 540 |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
PLN02905 | PLN02905 | 7.0e-76 | 121 | 502 | 399 | + beta-amylase |
PLN02801 | PLN02801 | 9.0e-88 | 88 | 502 | 433 | + beta-amylase |
PLN02161 | PLN02161 | 2.0e-91 | 23 | 503 | 509 | + beta-amylase |
PLN00197 | PLN00197 | 4.0e-104 | 88 | 526 | 458 | + beta-amylase; Provisional |
PLN02803 | PLN02803 | 2.0e-113 | 72 | 521 | 461 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD38148.1 | 0 | 87 | 536 | 1 | 450 | AF139501_1 beta-amylase [Prunus armeniaca] |
EMBL | CAI39245.1 | 0 | 1 | 536 | 1 | 536 | beta-amylase [Glycine max] |
EMBL | CAN66037.1 | 0 | 1 | 536 | 1 | 541 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002276777.1 | 0 | 1 | 536 | 1 | 541 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002516865.1 | 0 | 1 | 536 | 1 | 545 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1fa2_A | 0 | 86 | 527 | 13 | 463 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
PDB | 1b1y_A | 0 | 86 | 534 | 6 | 461 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 1v3i_A | 0 | 78 | 502 | 1 | 441 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
PDB | 1q6g_A | 0 | 78 | 502 | 1 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
PDB | 1q6d_A | 0 | 78 | 502 | 1 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CO121797 | 283 | 251 | 533 | 0 |
ES829862 | 295 | 243 | 537 | 0 |
HO781436 | 403 | 137 | 537 | 0 |
CO103897 | 279 | 189 | 467 | 0 |
HO781436 | 106 | 36 | 136 | 1e-17 |
Sequence Alignments (This image is cropped. Click for full image.) |
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