Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G261100.1 |
Family | CBM43 |
Protein Properties | Length: 135 Molecular Weight: 14516.3 Isoelectric Point: 5.8943 |
Chromosome | Chromosome/Scaffold: 11 Start: 59194146 End: 59195252 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 51 | 131 | 2.7e-30 |
CVSKPEASDAQLKKNLDWACKEGIDCSPVEPGAVCDDPASLRSRANYAMNTYYRTRGETKNACDFEGTGRLIDTNPSYGEC |
Full Sequence |
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Protein Sequence Length: 135 Download |
MKSLSSASFL LLSTVVFHLF SSAAAVETDA KPPIISKGDS KLSQSDGRKF CVSKPEASDA 60 QLKKNLDWAC KEGIDCSPVE PGAVCDDPAS LRSRANYAMN TYYRTRGETK NACDFEGTGR 120 LIDTNPSYGE CTYL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-16 | 51 | 119 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-31 | 49 | 133 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN83700.1 | 2e-25 | 47 | 134 | 237 | 324 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_176859.1 | 7e-25 | 47 | 133 | 23 | 110 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
RefSeq | NP_192648.2 | 4e-25 | 40 | 134 | 21 | 115 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
RefSeq | XP_002283647.1 | 1e-25 | 47 | 134 | 359 | 446 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002283660.1 | 1e-25 | 47 | 134 | 318 | 405 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 8e-25 | 50 | 133 | 13 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |