y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G261200.1 |
Family | CBM43 |
Protein Properties | Length: 133 Molecular Weight: 14291.2 Isoelectric Point: 7.7901 |
Chromosome | Chromosome/Scaffold: 11 Start: 59201722 End: 59202403 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 49 | 130 | 5.7e-32 |
CVPKPEASDAALQKNLDWACGQGIDCSPIQPGAICGDPATVRFRAQFAMNSYYRKQGGIDSACDFSGTAQITHVDPSSEKCK |
Full Sequence |
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Protein Sequence Length: 133 Download |
MKSLSNVSFL LLGTVFFHLF SSTAVEAASK GKLLHGEYKG AKDEDKRYCV PKPEASDAAL 60 QKNLDWACGQ GIDCSPIQPG AICGDPATVR FRAQFAMNSY YRKQGGIDSA CDFSGTAQIT 120 HVDPSSEKCK YV* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 9.0e-24 | 47 | 117 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-37 | 48 | 131 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95730.1 | 3e-25 | 44 | 131 | 360 | 447 | unknown [Populus trichocarpa] |
EMBL | CAN83700.1 | 5e-25 | 46 | 132 | 238 | 324 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002283660.1 | 5e-25 | 46 | 132 | 319 | 405 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
RefSeq | XP_002312097.1 | 3e-25 | 44 | 131 | 360 | 447 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530863.1 | 2e-25 | 46 | 132 | 371 | 457 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 7e-23 | 48 | 131 | 13 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |