| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.011G269900.1 |
| Family | GT47 |
| Protein Properties | Length: 349 Molecular Weight: 39633.2 Isoelectric Point: 6.1824 |
| Chromosome | Chromosome/Scaffold: 11 Start: 60160797 End: 60162347 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT47 | 43 | 293 | 3.09999e-40 |
| NFKIYAYPPPETLSFDSQVESLFYSSLIHSHFITQNPEEAHLFFIPFSFHSGLSARAAAYVVGNYRTEFIYWNRTLGADHFFLSCSGIVHGADRNVVELK KNSVQVSCFPTTAGLFIPHKDVSLPPLANVHAPVHAPGRKSSSYLGYVKYNWVKESNIKEQLLADPEFEVESEPSDQVTYEERLAGSKFCLFEYGPEISA IGEAMSFGCVPVVITDRPIQDLPLMDLLTWQQIAVFVGSSGGVNEIKRVLG | |||
| Full Sequence |
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| Protein Sequence Length: 349 Download |
| MSFPPFLCFF FFVSFLPLST PLTSSPYLSP TIFHPNYQKM TQNFKIYAYP PPETLSFDSQ 60 VESLFYSSLI HSHFITQNPE EAHLFFIPFS FHSGLSARAA AYVVGNYRTE FIYWNRTLGA 120 DHFFLSCSGI VHGADRNVVE LKKNSVQVSC FPTTAGLFIP HKDVSLPPLA NVHAPVHAPG 180 RKSSSYLGYV KYNWVKESNI KEQLLADPEF EVESEPSDQV TYEERLAGSK FCLFEYGPEI 240 SAIGEAMSFG CVPVVITDRP IQDLPLMDLL TWQQIAVFVG SSGGVNEIKR VLGRVVMAEY 300 EDMRESAAVA SKHFVWNDTP QPFDAFHMVM YQLWLRRHTI RYAEREWA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 2.0e-25 | 44 | 279 | 275 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002282317.1 | 0 | 24 | 347 | 29 | 359 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002307304.1 | 0 | 24 | 342 | 65 | 406 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002311191.1 | 0 | 6 | 348 | 7 | 345 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002316258.1 | 0 | 2 | 348 | 3 | 339 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002524235.1 | 0 | 1 | 347 | 3 | 336 | conserved hypothetical protein [Ricinus communis] |
