Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G290000.1 |
Family | AA1 |
Protein Properties | Length: 570 Molecular Weight: 62701.5 Isoelectric Point: 7.3724 |
Chromosome | Chromosome/Scaffold: 11 Start: 62138042 End: 62140662 |
Description | laccase 5 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 23 | 552 | 0 |
EVQRHQFVIQATPVKRLCNTHMAITVNGMLPGPTLEVKNGDTLEIEVVNKAKYNATIHWHGVRQMRTGWADGPEFVTQCPIRPGGSYTYRFTIEGQEGTL WWHAHSSWLRATVYGALIIRPREGESYPFPKPKRETAIVLGEWWDANPIDVVRQATMTGAAPNNSDAYTINGQPGDLYKCSSKDTTIVPIDVGETNLLRV INAALNQPLFFTVANHKLTVVGADASYLKPFATSVIMLGPGQTTDVLIQGNQLPARYYMAARAYQSAQNAPFDNTTTTAILEYKSAPCPAKKGINGPKPI MPSLPAYNDTNTVTAFSQSFRSPRKVEVPTEIDESLFFTVGLGLNNCPPNFPSSRCQGPNGTRFTASMNNVSFVLPQSISLLQAHQHGIPGVFTTDFPGT PPLKFDYTGNVSRSLYQPVPGTKLYKLKYGSKVQIVIQDTSIVTPENHPIHLHGYDFYIVAEGFGNFDPKTDTSKFNLVDPPQRNTVGVPVNGWAAIRFV ADNPGVWIMHCHLDVHITWGLAMAFVVENG |
Full Sequence |
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Protein Sequence Length: 570 Download |
MESFNTILFF LICSTMLCWV TGEVQRHQFV IQATPVKRLC NTHMAITVNG MLPGPTLEVK 60 NGDTLEIEVV NKAKYNATIH WHGVRQMRTG WADGPEFVTQ CPIRPGGSYT YRFTIEGQEG 120 TLWWHAHSSW LRATVYGALI IRPREGESYP FPKPKRETAI VLGEWWDANP IDVVRQATMT 180 GAAPNNSDAY TINGQPGDLY KCSSKDTTIV PIDVGETNLL RVINAALNQP LFFTVANHKL 240 TVVGADASYL KPFATSVIML GPGQTTDVLI QGNQLPARYY MAARAYQSAQ NAPFDNTTTT 300 AILEYKSAPC PAKKGINGPK PIMPSLPAYN DTNTVTAFSQ SFRSPRKVEV PTEIDESLFF 360 TVGLGLNNCP PNFPSSRCQG PNGTRFTASM NNVSFVLPQS ISLLQAHQHG IPGVFTTDFP 420 GTPPLKFDYT GNVSRSLYQP VPGTKLYKLK YGSKVQIVIQ DTSIVTPENH PIHLHGYDFY 480 IVAEGFGNFD PKTDTSKFNL VDPPQRNTVG VPVNGWAAIR FVADNPGVWI MHCHLDVHIT 540 WGLAMAFVVE NGLGELQSLQ APPPDLPIC* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam07732 | Cu-oxidase_3 | 7.0e-53 | 30 | 146 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. |
PLN02191 | PLN02191 | 6.0e-68 | 40 | 548 | 540 | + L-ascorbate oxidase |
PLN02604 | PLN02604 | 1.0e-80 | 7 | 558 | 583 | + oxidoreductase |
TIGR03388 | ascorbase | 9.0e-88 | 40 | 547 | 540 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
TIGR03389 | laccase | 0 | 22 | 569 | 553 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92474.1 | 0 | 22 | 569 | 6 | 550 | unknown [Populus trichocarpa] |
EMBL | CBI25418.1 | 0 | 14 | 569 | 23 | 577 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002273875.1 | 0 | 14 | 569 | 23 | 576 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312186.1 | 0 | 22 | 569 | 30 | 574 | laccase 90a [Populus trichocarpa] |
RefSeq | XP_002315131.1 | 0 | 7 | 569 | 16 | 575 | laccase 90c [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 40 | 548 | 19 | 522 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 1asq_A | 0 | 40 | 548 | 19 | 522 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 1asp_B | 0 | 40 | 548 | 19 | 522 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 1asp_A | 0 | 40 | 548 | 19 | 522 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 1aso_B | 0 | 40 | 548 | 19 | 522 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |