Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G290600.1 |
Family | GH85 |
Protein Properties | Length: 690 Molecular Weight: 76794.5 Isoelectric Point: 4.7542 |
Chromosome | Chromosome/Scaffold: 11 Start: 62185841 End: 62192290 |
Description | Glycosyl hydrolase family 85 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH85 | 74 | 355 | 0 |
MQGGYVDDKWIQGGENSGAYAIWHWYLIDVFVYFSHYLVTLPPPCWTNTAHTHGVKVLGTFIVEGEEGTATCNKMLSTKESAHKYAQLLVELAVALGFDG WLLNMEVDLAISQIPNLKEFVSYLTQTMHSSVPGSLVIWYDSVTIDGTLSWQNQLNEENKPFFDISDGIFVNYFWEEDGPKLSATVAGDRKLDVYMGIDV FGRGTYGGGQWTTNVALDVIKKDDVSAAIFAPGWVYETKQPPDFQTAQNRWWSLVEKSWGIVQNYPKTLPFYSNFDQGRGNH |
Full Sequence |
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Protein Sequence Length: 690 Download |
MSGQPNDQKS DPTPPPFDPS KPSVPISYPI KTLEDLENGS YYKSFHYPFN KSSVPLRPNT 60 GLAQRPRVLV CHDMQGGYVD DKWIQGGENS GAYAIWHWYL IDVFVYFSHY LVTLPPPCWT 120 NTAHTHGVKV LGTFIVEGEE GTATCNKMLS TKESAHKYAQ LLVELAVALG FDGWLLNMEV 180 DLAISQIPNL KEFVSYLTQT MHSSVPGSLV IWYDSVTIDG TLSWQNQLNE ENKPFFDISD 240 GIFVNYFWEE DGPKLSATVA GDRKLDVYMG IDVFGRGTYG GGQWTTNVAL DVIKKDDVSA 300 AIFAPGWVYE TKQPPDFQTA QNRWWSLVEK SWGIVQNYPK TLPFYSNFDQ GRGNHISVDG 360 AQVLSTQWNN ISSQTFQPFL EYVDDSTSKT IEVRVDFKEA SFNGGGNITF KGTLEAGASF 420 STRLFSGQLL MGPLPIYFTY SVNSEGNSQL GLSLELSSET EGKKKLFLAS QGTNQFSSEV 480 LMPRRLTTPD NAPGWVMQEV SIAMNGYTLT EIHAVCYKQQ PEITNTTEYF AVLGDIKIST 540 SSKNTEFPPS TSWIVNGQDI EWGTSQGSKT LSLKISWKPE DEKGPLFPKY NIYVEKLSKQ 600 SIRTLKGTLE SVREYIGVAH IEAFYVSQLV IPSDTSSLKF IIQVCNVDGA SQNLDDAPFF 660 QLDVQSSTNI LSLLFGCLPS LVKNIIAYL* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
COG4724 | COG4724 | 5.0e-39 | 49 | 431 | 422 | + Endo-beta-N-acetylglucosaminidase D [Carbohydrate transport and metabolism] |
pfam03644 | Glyco_hydro_85 | 1.0e-120 | 74 | 358 | 304 | + Glycosyl hydrolase family 85. Family of endo-beta-N-acetylglucosaminidases. These enzymes work on a broad spectrum of substrates. |
cd06547 | GH85_ENGase | 1.0e-132 | 69 | 378 | 330 | + Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins. The beta-1,4-glycosyl bond located between two N-acetylglucosamine residues is hydrolyzed such that N-acetylglucosamine 1 remains with the protein and N-acetylglucosamine 2 forms the reducing end of the released glycan. ENGase is a key enzyme in the processing of free oligosaccharides in the cytosol of eukaryotes. Oligosaccharides formed in the lumen of the endoplasmic reticulum are transported into the cytosol where they are catabolized by cytosolic ENGases and other enzymes, possibly to maximize the reutilization of the component sugars. ENGases have an eight-stranded alpha/beta barrel topology and are classified as a family 85 glycosyl hydrolase (GH85) domain. The GH85 ENGases are sequence-similar to the family 18 glycosyl hydrolases, also known as GH18 chitinases. An ENGase-like protein is also found in bacteria and is included in this alignment model. |
Gene Ontology | |
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GO Term | Description |
GO:0005737 | cytoplasm |
GO:0033925 | mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002273683.1 | 0 | 4 | 665 | 3 | 688 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002315137.1 | 0 | 23 | 665 | 26 | 697 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315138.1 | 0 | 5 | 665 | 7 | 694 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002520781.1 | 0 | 2 | 665 | 4 | 691 | endo beta n-acetylglucosaminidase, putative [Ricinus communis] |
RefSeq | XP_002520784.1 | 0 | 1 | 665 | 1 | 685 | endo beta n-acetylglucosaminidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3fhq_F | 5e-28 | 48 | 461 | 28 | 469 | A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A |
PDB | 3fhq_D | 5e-28 | 48 | 461 | 28 | 469 | A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A |
PDB | 3fhq_B | 5e-28 | 48 | 461 | 28 | 469 | A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A |
PDB | 3fhq_A | 5e-28 | 48 | 461 | 28 | 469 | A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A |
PDB | 3fha_D | 5e-28 | 48 | 461 | 28 | 469 | A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EL437937 | 257 | 93 | 349 | 0 |
JG621224 | 270 | 118 | 386 | 0 |
GR107739 | 245 | 68 | 312 | 0 |
EL344986 | 246 | 89 | 334 | 0 |
DW168655 | 256 | 187 | 442 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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