Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.012G002600.1 |
Family | CE8 |
Protein Properties | Length: 549 Molecular Weight: 60381.9 Isoelectric Point: 8.5167 |
Chromosome | Chromosome/Scaffold: 12 Start: 270723 End: 273635 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 234 | 530 | 0 |
DIIVSKDGNGTVETISEAIKKAPENSSRRIVIYVRAGRYEETNLKVGRKKMNLMFIGDGKGKTVISGGKSVFDNVTTFHTATFAATGSGFIARDMTFENW AGPTKHQAVALRVGADHAVVYKCNIIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQNCSIYARKPMPFQKNTITAQSRKDPHQNTGISIHACRI LPTPDLAVMNGSFQTYLGRPWKLHSRVVFMLSYMHDHIDPRGWLEWNGSFALDSLYYGEYMNYGAGAAVGQRVKWPGYRVITSESEASNFTVAQFIY |
Full Sequence |
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Protein Sequence Length: 549 Download |
MAPPKNLITI FLLFVFTMIN VCAAGRGAAV IRHNPTQAIS NTCSRTRFPN HCVNSLLKFP 60 DSFTASEQDL VHVSFNMTLQ HFSDALYMTT SVSNIKMYPR VRSAFDACLE LLVDSIEALS 120 RSLSAVIHKG GSTQDVMTWL SAALTNLDTC AEGFEGVTGA LKDHVVAKLN DLSQLVSNCL 180 SIFAATGGDD FAGASGENKR LLASSPSNEE KFPKWVGRIE RKLLDTPLSE IQADIIVSKD 240 GNGTVETISE AIKKAPENSS RRIVIYVRAG RYEETNLKVG RKKMNLMFIG DGKGKTVISG 300 GKSVFDNVTT FHTATFAATG SGFIARDMTF ENWAGPTKHQ AVALRVGADH AVVYKCNIIG 360 YQDTLYVHSN RQFYRECDIY GTVDFIFGNA AVVLQNCSIY ARKPMPFQKN TITAQSRKDP 420 HQNTGISIHA CRILPTPDLA VMNGSFQTYL GRPWKLHSRV VFMLSYMHDH IDPRGWLEWN 480 GSFALDSLYY GEYMNYGAGA AVGQRVKWPG YRVITSESEA SNFTVAQFIY GTLWLPSTGI 540 AFLAGLQV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02506 | PLN02506 | 2.0e-161 | 36 | 546 | 519 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 5.0e-174 | 9 | 548 | 547 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 2.0e-176 | 9 | 546 | 551 | + pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 0 | 31 | 548 | 521 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 234 | 531 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF42038.1 | 0 | 31 | 548 | 81 | 617 | pectin methylesterase 1 [Pyrus communis] |
RefSeq | NP_190491.1 | 0 | 35 | 548 | 83 | 598 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002278061.1 | 0 | 31 | 548 | 68 | 597 | PREDICTED: similar to pectin methylesterase 1 [Vitis vinifera] |
RefSeq | XP_002317777.1 | 0 | 29 | 546 | 27 | 550 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321999.1 | 0 | 28 | 548 | 76 | 605 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 229 | 546 | 3 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 231 | 546 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 8e-20 | 238 | 537 | 12 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 8e-20 | 238 | 537 | 12 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-19 | 238 | 537 | 12 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |