| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.012G037700.1 |
| Family | GH35 |
| Protein Properties | Length: 717 Molecular Weight: 81437.4 Isoelectric Point: 5.5976 |
| Chromosome | Chromosome/Scaffold: 12 Start: 4677450 End: 4697742 |
| Description | Glycosyl hydrolase family 35 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 35 | 338 | 0 |
| LIINGQRKLLFSGSIHYPRSTPQMWSSLIAKAKEGGVDVIQTYVFWNLHEPQPGQYDFSGRYDLVKFIKEIQAQGLYACLRIGPFIESEWTYGGFPFWLH DVPGIVYRTDNEPFKFYMQNFTRKIVNLMKSEGLYASQGGPIILSQIENEYQNVEAAFHEKGPIYVKWAAKMGVELETGVPWVMCKQTDAPDPVINTCNG MRCGETFGGPNSPNKPSMWTENWTSFYQVYGGEPYIRSAEDIAFHVALFIAKKGSYINYYMYHGGTNFGRTSSAYVITSYYDQAPLDEYGLLRQPKWGHL KKLH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 717 Download |
| MKVREMVWWW WIYIAVAVQA SIKGEDYVTY DGRSLIINGQ RKLLFSGSIH YPRSTPQMWS 60 SLIAKAKEGG VDVIQTYVFW NLHEPQPGQY DFSGRYDLVK FIKEIQAQGL YACLRIGPFI 120 ESEWTYGGFP FWLHDVPGIV YRTDNEPFKF YMQNFTRKIV NLMKSEGLYA SQGGPIILSQ 180 IENEYQNVEA AFHEKGPIYV KWAAKMGVEL ETGVPWVMCK QTDAPDPVIN TCNGMRCGET 240 FGGPNSPNKP SMWTENWTSF YQVYGGEPYI RSAEDIAFHV ALFIAKKGSY INYYMYHGGT 300 NFGRTSSAYV ITSYYDQAPL DEYGLLRQPK WGHLKKLHIV IKNCFTPLLQ GVQSNFSIGP 360 LQQAYVYEEG MGACVAFLVN NDSTKNATVQ FQNNSFELLP KSIGILPDCQ NMVFNTAKVS 420 TKPNKRITTL TKMFNEVDMW KEFKEDIPNF LDTSLRSNSL LEHMNTTQDK SDYLWYTFSF 480 QPNSTCSQPV LHVESLGHVV HAYINTIFIE AGHGSHDTKG FSMDIPITLI DGINNVSILS 540 VMVGLPDSGA FLESRYAGLT KVTIQCSESY IYDFTNYTWG YQIGLEGEKL QVFKEQSLEE 600 VEWSEIDDST NKSLTWYKTT FDAPIGDEPI ALNMSSMQKG EVWVNEQSIG RYWVSFLTSK 660 GNPSQTLYHV PRSFLNPTGN LLVVLEELNG DPLQISLNTI SLVNVNSPFS YHHLPQ* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13364 | BetaGal_dom4_5 | 0.004 | 615 | 690 | 78 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
| pfam02449 | Glyco_hydro_42 | 3.0e-7 | 50 | 193 | 158 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 2.0e-22 | 28 | 309 | 319 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 4.0e-153 | 34 | 338 | 319 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 28 | 697 | 701 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF01618.1 | 0 | 28 | 703 | 32 | 708 | beta-galactosidase like protein [Arabidopsis thaliana] |
| EMBL | CAN82672.1 | 0 | 28 | 705 | 26 | 676 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI21611.1 | 0 | 28 | 716 | 26 | 721 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002274012.1 | 0 | 28 | 716 | 62 | 750 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002307056.1 | 0 | 6 | 716 | 1 | 715 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 5e-37 | 34 | 337 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.001 | 615 | 686 | 509 | 572 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 3e-29 | 28 | 328 | 11 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 3e-29 | 28 | 328 | 11 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 3e-29 | 28 | 328 | 11 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
