Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.012G103300.1 |
Family | GT14 |
Protein Properties | Length: 341 Molecular Weight: 38803.3 Isoelectric Point: 9.2574 |
Chromosome | Chromosome/Scaffold: 12 Start: 23040797 End: 23045926 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 136 | 214 | 4.8e-23 |
KEAQDWDWFVNLSASDYPLMSQDDIVHIFSFLHRDLTFVEHTSSIGWKEYPGARPIIIDPGLYHAKKSGVFWAKEKRSF |
Full Sequence |
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Protein Sequence Length: 341 Download |
MKRAHFPYSP DRSWHLAVTV ISFISLSFLL ALTFIQGNSS SFETQPKFSF SDRAYGGLPE 60 LSRFAYLISG TKGDGPRVKQ LLQGVYHPRN YGVLHLDLEA SDSERMELAK YVKSERVVGE 120 FENVIVIGNA DLVTYKEAQD WDWFVNLSAS DYPLMSQDDI VHIFSFLHRD LTFVEHTSSI 180 GWKEYPGARP IIIDPGLYHA KKSGVFWAKE KRSFLLLSNY QNTTVNHDLY YIIWDNPPKQ 240 HPMTLTLKHF DDMVQSGTPF APKFAKDDLV LDKIDKGLLR RSYGKFTPSG WCVGGSFSSK 300 DPCVVYGNPN AFKPTVNSKR LKKLLIKLFD SESFRSKQCK * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 6.0e-31 | 64 | 254 | 252 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 1.0e-99 | 59 | 340 | 352 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK26987.1 | 0 | 49 | 339 | 63 | 423 | unknown [Picea sitchensis] |
GenBank | ACU24011.1 | 0 | 48 | 340 | 39 | 398 | unknown [Glycine max] |
RefSeq | XP_002269924.1 | 0 | 49 | 340 | 104 | 465 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309670.1 | 0 | 1 | 340 | 1 | 417 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527729.1 | 0 | 44 | 339 | 23 | 388 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.007 | 80 | 161 | 101 | 193 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.007 | 80 | 161 | 101 | 193 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.007 | 80 | 161 | 101 | 193 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.007 | 80 | 161 | 101 | 193 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |